CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037872_P001	Maize	plasma membrane	92.99	92.36
Os05t0373300-01	Rice	plasma membrane	83.59	82.05
TraesCS1A01G236100.4	Wheat	cytosol	81.2	80.51
TraesCS1B01G247700.2	Wheat	cytosol	80.85	80.17
TraesCS1D01G236200.1	Wheat	cytosol	80.34	79.66
TraesCS6B01G074300.2	Wheat	cytosol	79.66	78.98
TraesCS6D01G057900.2	Wheat	cytosol	79.32	78.64
HORVU6Hr1G010680.1	Barley	cytosol	76.41	75.25
TraesCS6A01G058200.2	Wheat	cytosol, plastid	78.97	72.99
VIT_18s0001g15760.t01	Wine grape	cytosol, extracellular	11.97	72.92
HORVU1Hr1G058000.10	Barley	cytosol	79.32	70.2
GSMUA_Achr5P08050_001	Banana	cytosol	70.09	69.02
VIT_18s0072g00560.t01	Wine grape	peroxisome	19.49	67.86
VIT_14s0030g00540.t01	Wine grape	cytosol	52.14	66.59
VIT_14s0030g00550.t01	Wine grape	cytosol	53.68	65.69
Solyc10g045500.1.1	Tomato	cytosol	14.36	65.62
VIT_14s0030g00600.t01	Wine grape	cytosol	58.12	65.38
VIT_14s0030g00500.t01	Wine grape	cytosol	66.15	65.15
VIT_12s0121g00080.t01	Wine grape	cytosol	64.96	63.87
CDY22660	Canola	cytosol	62.39	62.82
CDY06335	Canola	cytosol	62.39	62.61
Bra031645.1-P	Field mustard	cytosol	62.22	62.44
AT1G08860.1	Thale cress	cytosol	62.05	62.16
KRH68626	Soybean	cytosol	61.54	62.07
KRH68625	Soybean	cytosol	62.05	61.42
KRG96891	Soybean	cytosol	61.37	60.44
VIT_14s0030g00570.t01	Wine grape	cytosol	64.96	56.97
KXG30293	Sorghum	cytosol	52.65	53.29
TraesCS7A01G414000.1	Wheat	cytosol	53.16	52.89
EER98488	Sorghum	endoplasmic reticulum, golgi	12.65	23.64
KXG25698	Sorghum	cytosol	15.73	22.89
EES04073	Sorghum	nucleus	17.78	22.66
EES13310	Sorghum	mitochondrion	15.38	22.06
KXG34172	Sorghum	nucleus	14.36	21.71
KXG20338	Sorghum	nucleus	16.58	21.7
OQU79014	Sorghum	plastid	15.9	17.58
OQU79015	Sorghum	mitochondrion	0.85	6.02

Protein Annotations

Gene3D:2.60.40.150	MapMan:27.2.7	UniProt:A0A1B6P861	InterPro:BONZAI	InterPro:C2B_Copine	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:Copine	GO:GO:0003674	GO:GO:0005488	GO:GO:0005544	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0008150	GO:GO:0008219	GO:GO:0008289	GO:GO:0009987
GO:GO:0016020	GO:GO:0060548	GO:GO:0090332	InterPro:IPR000008	InterPro:IPR002035	InterPro:IPR035892
InterPro:IPR036465	EnsemblPlants:KXG21864	ProteinID:KXG21864	ProteinID:KXG21864.1	PFAM:PF00168	PFAM:PF07002
PANTHER:PTHR10857	PANTHER:PTHR10857:SF108	SMART:SM00239	SMART:SM00327	EnsemblPlantsGene:SORBI_3009G118300	SUPFAM:SSF49562
SUPFAM:SSF53300	UniParc:UPI00081AE672	InterPro:VWF_A	InterPro:vWFA_dom_sf	:	:

Description

hypothetical protein

Coordinates

chr9:+:46337787..46343799

Molecular Weight (calculated)

64507.8 Da

IEP (calculated)

5.225

GRAVY (calculated)

-0.149

Length

585 amino acids

Sequence
(BLAST)

001: MGGCFSLDGD VRGGMEAVGG GVTAASAQQG GLNDAVDYFF QTRGLRGLYT PIELSFSASK LRNLDAFSKS DPMLVVYTNI KGKLEEIGRT EVILNSLEPS
101: WITKVTMSYQ FEIVQPFIFR IYDVDTKYHN TPVKMLNLSQ QDFLGEACCN LSEIVTKFNH SLTLNLRSDC GHGLHGTITV HAEESDSSRM AVEMTLRCLN
201: LENKDVFSKS DPFLRISKLV ETAGPIPICK TEVVPDNLNP VWRPITLTSQ QYGSKDNPLL VECFDFNSSG DHVLIGAFQT TITQLESLYT SKSGANFYSH
301: KGQRKMKGQL FVDKLQETVQ HTFLDYISSG FELNFMVAVD FTASNGDPRV PQSLHYIDPS GRPNSYQQAI LGVGEVLQFY DTDRRFPAWG FGARAQGHIS
401: HCFNLNTATN DCEVVGVEGI MSAYTSSLYS VSLAGPTMFG PVINKAAEIA SQSLQYSNNK YFVLLIITDG VLTDIQETKD CIVRASDLPL SILIVGVGNA
501: DFKQMEILDA DNGKRLESST GRIATRDIVQ FVPMREVQGG EISVVQSLLE ELPGQFLHYM RTRGIKPQQQ QGAGLASAPV YPPQQ

Best Arabidopsis Sequence Match ( AT1G08860.1 )
(BLAST)

001: MGGCLSGDVK GGKQAIGGVQ QRPTSSTIAN NAAHNDAVDF FFRSRGQYPL FSQIELTLSA SNLLDCDITS KSDPMAVMYL RKKDGRLEEI GRTEVILNNL
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI

Arabidopsis Description

BON3Protein BONZAI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XQC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.