Factsheet for Os05t0373300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG21864	Sorghum	cytosol	82.05	83.59
TraesCS1D01G236200.1	Wheat	cytosol	82.21	83.05
TraesCS1A01G236100.4	Wheat	cytosol	81.54	82.37
TraesCS1B01G247700.2	Wheat	cytosol	81.38	82.2
Zm00001d037872_P001	Maize	plasma membrane	80.87	81.83
TraesCS6B01G074300.2	Wheat	cytosol	80.03	80.85
TraesCS6D01G057900.2	Wheat	cytosol	79.7	80.51
HORVU6Hr1G010680.1	Barley	cytosol	75.84	76.09
TraesCS6A01G058200.2	Wheat	cytosol, plastid	79.19	74.57
HORVU1Hr1G058000.10	Barley	cytosol	81.38	73.37
VIT_18s0001g15760.t01	Wine grape	cytosol, extracellular	11.41	70.83
GSMUA_Achr5P08050_001	Banana	cytosol	67.45	67.68
Solyc10g045500.1.1	Tomato	cytosol	14.43	67.19
VIT_18s0072g00560.t01	Wine grape	peroxisome	18.79	66.67
VIT_14s0030g00540.t01	Wine grape	cytosol	51.01	66.38
VIT_14s0030g00550.t01	Wine grape	cytosol	52.35	65.27
VIT_14s0030g00600.t01	Wine grape	cytosol	56.88	65.19
VIT_14s0030g00500.t01	Wine grape	cytosol	63.93	64.14
VIT_12s0121g00080.t01	Wine grape	cytosol	63.26	63.36
CDY22660	Canola	cytosol	61.74	63.34
AT1G08860.1	Thale cress	cytosol	61.41	62.67
CDY06335	Canola	cytosol	61.07	62.44
Bra031645.1-P	Field mustard	cytosol	60.91	62.26
KRH68626	Soybean	cytosol	59.73	61.38
KRH68625	Soybean	cytosol	59.73	60.24
KRG96891	Soybean	cytosol	59.73	59.93
VIT_14s0030g00570.t01	Wine grape	cytosol	63.59	56.82
Os02t0521300-01	Rice	plasma membrane	52.52	53.6
TraesCS7A01G414000.1	Wheat	cytosol	52.68	53.4
Os09t0565300-01	Rice	cytosol	4.03	25.0
Os08t0135400-01	Rice	plasma membrane	15.77	23.44
Os01t0908700-01	Rice	plasma membrane, plastid	17.11	22.87
Os08t0494300-01	Rice	plasma membrane	15.1	22.73
Os06t0608800-02	Rice	nucleus	16.78	22.37
Os01t0960500-01	Rice	plasma membrane	14.26	21.96
Os12t0288400-01	Rice	endoplasmic reticulum, extracellular, vacuole	16.61	18.13
Os09t0565350-00	Rice	cytosol	1.85	2.48
Os09t0565200-02	Rice	extracellular	0.67	1.24

Protein Annotations

Gene3D:2.60.40.150	MapMan:27.2.7	EntrezGene:9266651	UniProt:A0A0P0WLH0	ProteinID:BAS93708.1	InterPro:BONZAI
InterPro:C2B_Copine	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:Copine	GO:GO:0003674	GO:GO:0005488
GO:GO:0005544	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0008150	GO:GO:0008219
GO:GO:0008289	GO:GO:0009987	GO:GO:0016020	GO:GO:0060548	GO:GO:0090332	InterPro:IPR000008
InterPro:IPR002035	InterPro:IPR035892	InterPro:IPR036465	EnsemblPlantsGene:Os05g0373300	EnsemblPlants:Os05t0373300-01	PFAM:PF00168
PFAM:PF07002	PFscan:PS50004	PFscan:PS50234	PANTHER:PTHR10857	PANTHER:PTHR10857:SF108	SMART:SM00239
SMART:SM00327	SUPFAM:SSF49562	SUPFAM:SSF53300	UniParc:UPI0001C7CDDE	InterPro:VWF_A	RefSeq:XP_015637670.1
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

Similar to predicted protein. (Os05t0373300-01)

Coordinates

chr5:+:17983282..17989897

Molecular Weight (calculated)

64940.1 Da

IEP (calculated)

5.472

GRAVY (calculated)

-0.183

Length

596 amino acids

Sequence
(BLAST)

001: MGGCLSGDVR GGMEAVGGSG GRGAAGTGGG GGGGAGQGGG ANEAVDHFFN AAGLRGLYSP LELSFSASKL RNMDAFSKSD PMLVIYIRKD ARLEEIGRTE
101: VILNSLEPSW ITKATISYQF EIIQPLVFKI YDIDTRYHNT PVKTLNLAQQ DFLGEACCNL SEIVTNNHSL TLNLRDSCGH TLLGTVTVHA EESNSSRMAV
201: EMTLHALNLE NKDVFSKSDP FLRISRLVET AGPIPICKTE VISNNLNPVW RPIILTSQQF GSKDNPLLVE CFDFDSSGDH ELIGTFQTTI TQLENVYNSK
301: SGANFFSHKG QKKLKGQLFV DKFQEKVQHT FLDYISSGFE LNFMVAVDFT ASNGDPRSPQ SLHYIDPSGR PNSYQQAILG VGEVLQFYDN DRRFPAWGFG
401: AKTPQGYISH CFNLNATTND CEVVGVEGIM SAYTSTLYSV TLAGPTLFGP IINKAAEIAS HSLQYGNNKY FVLLIITDGV LTDIQETKDS IVRASDLPLS
501: ILIVGVGNAD FKQMEILDGD NGKRLESSTG RIATRDIVQF VPMRDVQGGQ ISVVQSLLEE LPGQFLAYMR SRDIKPRAPL QHDNASSAPP LYPPTK

Best Arabidopsis Sequence Match ( AT1G08860.1 )
(BLAST)

001: MGGCLSGDVK GGKQAIGGVQ QRPTSSTIAN NAAHNDAVDF FFRSRGQYPL FSQIELTLSA SNLLDCDITS KSDPMAVMYL RKKDGRLEEI GRTEVILNNL
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI

Arabidopsis Description

BON3Protein BONZAI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XQC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.