Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0288400-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 5.42 | 4.4 |
| Os01t0908700-01 | Rice | plasma membrane, plastid | 3.16 | 3.14 |
| Os02t0521300-01 | Rice | plasma membrane | 3.16 | 2.4 |
| Os06t0608800-02 | Rice | nucleus | 2.03 | 2.01 |
| Bra007134.1-P | Field mustard | mitochondrion | 1.58 | 1.93 |
| Os05t0373300-01 | Rice | plasma membrane | 2.48 | 1.85 |
| PGSC0003DMT400049766 | Potato | extracellular | 0.45 | 1.69 |
| Os08t0494300-01 | Rice | plasma membrane | 1.35 | 1.52 |
| Os08t0135400-01 | Rice | plasma membrane | 1.35 | 1.5 |
| Os09t0565300-01 | Rice | cytosol | 0.23 | 1.04 |
| Os01t0960500-01 | Rice | plasma membrane | 0.9 | 1.03 |
| Os09t0565200-02 | Rice | extracellular | 0.0 | 0.0 |
| Solyc10g045520.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os09t0565350-00 | EnsemblPlantsGene:Os09g0565350 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf | ncoils:Coil | PANTHER:PTHR33110 | ProteinID:BAT09447.1 |
| SEG:seg | SUPFAM:SSF81383 | UniParc:UPI0003939DA3 | UniProt:A0A0P0XRQ9 | MapMan:35.2 | : |
Description
F-box protein 506Conserved hypothetical protein. (Os09t0565350-00)
Coordinates
chr9:-:22511958..22513289
Molecular Weight (calculated)
49180.5 Da
IEP (calculated)
7.877
GRAVY (calculated)
-0.219
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDEPKKRTS ARRARRRASA GLTKASEEEE HVVVVVPPWA DLPFDLLADI SRRLHATADF ARFHAVCKSW RRTLPPHPPT FLPWLLSPGD ATGHRTARCV
101: FSKSSRHPAA APIRIPTKSQ LAIGYDGEPC SLYYPLIMTG GAAATTPLPS CPDEMKTWAD HFFFSVSGDG TVFVYALGET YWDQYDHAYR CHFHAAILRP
201: GDEAWMLMDR HLIVNFPYLL RDVCRVLYTD DGKMLLHNGK DYWCVVTTGA ATTAGEGKWS RWWPEEPGKE IQSSHLLEYR GELLWAFVLA DSGYCSDVRG
301: CRVAGRPLAS ALSVSVYALE AEGGGSWVWV RKDGRSMDDR ALFLGRPVSL AMDAAQLGVG RGSGCAYFVH RWAWATAAGR ERCRVLRYSF GDATSEVVEL
401: LPRAVAQWWS EGGDGCIWLA SPPPPAIALA PTTIEVTQPR AQK
101: FSKSSRHPAA APIRIPTKSQ LAIGYDGEPC SLYYPLIMTG GAAATTPLPS CPDEMKTWAD HFFFSVSGDG TVFVYALGET YWDQYDHAYR CHFHAAILRP
201: GDEAWMLMDR HLIVNFPYLL RDVCRVLYTD DGKMLLHNGK DYWCVVTTGA ATTAGEGKWS RWWPEEPGKE IQSSHLLEYR GELLWAFVLA DSGYCSDVRG
301: CRVAGRPLAS ALSVSVYALE AEGGGSWVWV RKDGRSMDDR ALFLGRPVSL AMDAAQLGVG RGSGCAYFVH RWAWATAAGR ERCRVLRYSF GDATSEVVEL
401: LPRAVAQWWS EGGDGCIWLA SPPPPAIALA PTTIEVTQPR AQK
001: MEKNQNPNTW SDLPLDLLNL VFKRLSFANF RQAKSVCSSW YSASKQSVPK NQIPWLMLFP KDKNNNKNSS CTIFFNPEDK DQLYQTQDLG VEFAKSVCLA
101: TYGSWLLMQD SKYNLYILNP FTYEKIGLPA IESQQVGMVK VDQTIDDDFL TFDDHNHVKL FKGNNTVRTP VFWIDEKTKE YIALWGLGYW CVVYAKNGDK
201: LWNQIPEIIL DSLDMVYKDH KLYSFSYRNL FTILDFSGEI PRKAFQCFMH VYRSEWLSPR SRQLSNSWCV AETKLVVTVT GDVLLVERML RHWSRIQSFN
301: VYKFYSSGTF LDKYELADSL GDEAMLLDLG ITVLANEVEG LHRNTIYFSD SHDTTTKDLF LFNYETREME PLHKFDFDCS LLELSARWFL PSFSHT
101: TYGSWLLMQD SKYNLYILNP FTYEKIGLPA IESQQVGMVK VDQTIDDDFL TFDDHNHVKL FKGNNTVRTP VFWIDEKTKE YIALWGLGYW CVVYAKNGDK
201: LWNQIPEIIL DSLDMVYKDH KLYSFSYRNL FTILDFSGEI PRKAFQCFMH VYRSEWLSPR SRQLSNSWCV AETKLVVTVT GDVLLVERML RHWSRIQSFN
301: VYKFYSSGTF LDKYELADSL GDEAMLLDLG ITVLANEVEG LHRNTIYFSD SHDTTTKDLF LFNYETREME PLHKFDFDCS LLELSARWFL PSFSHT
Arabidopsis Description
Putative F-box protein At4g22660 [Source:UniProtKB/Swiss-Prot;Acc:O49647]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.