Factsheet for Os02t0521300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611
plasma membrane: 18557835
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G176800.1	Wheat	cytosol, nucleus, plastid	85.79	87.28
TraesCS6A01G189800.1	Wheat	cytosol	85.62	87.11
KXG30293	Sorghum	cytosol	85.45	86.33
TraesCS6B01G235200.1	Wheat	plastid	84.93	85.96
Zm00001d016615_P002	Maize	plasma membrane	77.91	83.64
HORVU6Hr1G041140.14	Barley	mitochondrion	84.42	76.55
GSMUA_AchrUn_...	Banana	cytosol, golgi, plastid	52.4	69.86
VIT_17s0000g00210.t01	Wine grape	cytosol	65.24	66.15
KRH41052	Soybean	endoplasmic reticulum	63.53	63.97
KRH20017	Soybean	cytosol	29.45	63.0
Solyc03g118200.2.1	Tomato	cytosol	61.82	62.24
KRH54085	Soybean	cytosol	61.47	62.11
CDX98983	Canola	cytosol, plastid	25.68	61.22
AT5G61900.3	Thale cress	cytosol	58.9	59.52
Solyc06g068840.2.1	Tomato	cytosol	58.39	59.1
CDX78287	Canola	cytosol	58.9	58.6
Bra005931.1-P	Field mustard	cytosol	58.9	58.6
CDY00235	Canola	cytosol	57.71	58.1
Bra010041.1-P	Field mustard	cytosol	57.71	58.1
CDX81044	Canola	cytosol	58.39	58.09
CDX86951	Canola	cytosol	57.36	57.76
AT5G07300.1	Thale cress	cytosol	57.88	57.68
CDX98984	Canola	cytosol	57.88	57.58
KRH63871	Soybean	cytosol	61.3	57.56
Bra029301.1-P	Field mustard	cytosol, plastid	57.19	57.49
CDX70026	Canola	cytosol	57.88	57.39
Bra009273.1-P	Field mustard	cytosol	57.71	57.22
Os05t0373300-01	Rice	plasma membrane	53.6	52.52
AT5G61910.4	Thale cress	cytosol	58.9	25.56
Os09t0565300-01	Rice	cytosol	3.77	22.92
Os06t0608800-02	Rice	nucleus	16.61	21.7
Os08t0494300-01	Rice	plasma membrane	14.04	20.71
Os08t0135400-01	Rice	plasma membrane	13.7	19.95
Os01t0960500-01	Rice	plasma membrane	13.18	19.9
Os01t0908700-01	Rice	plasma membrane, plastid	15.07	19.73
Os12t0288400-01	Rice	endoplasmic reticulum, extracellular, vacuole	15.75	16.85
Os09t0565350-00	Rice	cytosol	2.4	3.16
Os09t0565200-02	Rice	extracellular	0.0	0.0

Protein Annotations

Gene3D:2.60.40.150	MapMan:27.2.7	EntrezGene:4329499	EMBL:AK120851	ProteinID:BAD26136.1	ProteinID:BAF08890.1
ProteinID:BAS78951.1	InterPro:BONZAI	InterPro:C2B_Copine	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:Copine
GO:GO:0003674	GO:GO:0005488	GO:GO:0005544	GO:GO:0008150	GO:GO:0008219	GO:GO:0008289
GO:GO:0009987	GO:GO:0060548	InterPro:IPR000008	InterPro:IPR002035	InterPro:IPR035892	InterPro:IPR036465
EnsemblPlantsGene:Os02g0521300	EnsemblPlants:Os02t0521300-01	PFAM:PF00168	PFAM:PF07002	PFscan:PS50004	PANTHER:PTHR10857
PANTHER:PTHR10857:SF108	UniProt:Q6H563	SMART:SM00239	SMART:SM00327	SUPFAM:SSF49562	SUPFAM:SSF53300
UniParc:UPI00003B4625	InterPro:VWF_A	RefSeq:XP_015626785.1	SEG:seg	InterPro:vWFA_dom_sf	:

Description

C2 domain containing protein. (Os02t0521300-01)

Coordinates

chr2:-:18994018..19001080

Molecular Weight (calculated)

63834.0 Da

IEP (calculated)

5.089

GRAVY (calculated)

-0.158

Length

584 amino acids

Sequence
(BLAST)

001: MGNCCSDEMG GGGGHAGRHS VGPAAAAAAA AAEAASAAAD RFLRSRGAGA STQVELSLSA SNLGDQEFFT KSNPMVIVYS KSKEGALEEL GRTEVILNSL
101: NPSWNARINV HYQFEVLQPI VFQVYDIDPQ FHDVNEKMLK LEEQQFLGEA VCLLSEVITK QNRLLTLKLG VSEHNLPNPS KFGELNVQAE ESAGSKAIME
201: MVFRCSDLEI KDLLSKSDPF LLISRISESG VPVPICKTEV RKNDLNPKWK PVILNLQQIG SKENPLIIEC FNFSSNGKHD LIGKIVKSVA ELEKMYHSQD
301: GENFFVPAST AHDSHSKEVL KSQVYVEKYL ENNRQTFLDY ISAGCQLNFM VAVDFTASNG NPRLPDSLHY IDPTGRPNAY QRAILEVGDV LQYYDPAKRF
401: PSWGFGARPI DGPVSHCFNL NGSTYQPEVE GIQGIMSAYI SALRNVSLAG PTLFGPVVST ATAIANQSLA NNQQKYFVLL IVTDGVVTDF QETIDAIIKA
501: SDFPLSILVV GVGGADFKEM EFLDPNKGER LESSTGRVAS RDMIQFAPMK DAHGSGISTV QSLLAEIPGQ FMTYMRTREI QAIS

Best Arabidopsis Sequence Match ( AT5G61900.1 )
(BLAST)

001: MGNCCSDVAS GAGATAGVGG SGSSAALGAT NDALDYYLKS KGFNGLFSQI ELSFSASNLR DRDVLSKSDP MVVVYQKEKD ATLSEVFRSE VVLNSLAPKW
101: IKKFIVAYHF ETVQTLVFRV YDVDTKFQNS REEMLKLDEQ QFLGEATCAL SEIITKSTRT STLELKRKDG FAPQAQPHHG KLIIHAEESL ASKISTEIVF
201: RCSNLESKDL FSKSDPFLVV SKIVEHGTPI PVSKTEVRKN DLNPIWKPVF LSVQQVGSKD SPVIIECSDF NSNGKHSLIG KVQKSLSDLE KLHLAGQGIN
301: FSLPTGAGQN KVLKSQLFVD KFTETVHHTF LEYLASGFEL NFMVAIDFTA SNGNPRLPDS LHYIDPSGRL NAYQRAIMDV GEVLQFYDSD KRFPAWGFGA
401: RPIDAPVSHC FNLNGSSSYS EVDGIQGIMT SYTSALFNVS LAGPTLFGPV INAAAMIASA SLAQGSRKYY VLLIITDGVI TDLQETKDAL VSASDLPLSI
501: LIVGVGGADF KEMEILDADK GERLESSSGR LASRDIVQFV ALRDVQYGEI SVVQALLAEL PSQFLTYMRI RNMKPIPP

Arabidopsis Description

BON1Protein BONZAI 1 [Source:UniProtKB/Swiss-Prot;Acc:Q941L3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.