Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70026 | Canola | cytosol | 95.74 | 95.42 |
| CDX98983 | Canola | cytosol, plastid | 38.16 | 91.43 |
| CDX78287 | Canola | cytosol | 91.14 | 91.14 |
| CDX81044 | Canola | cytosol | 90.8 | 90.8 |
| AT5G07300.1 | Thale cress | cytosol | 89.27 | 89.42 |
| CDY00235 | Canola | cytosol | 78.71 | 79.66 |
| CDX86951 | Canola | cytosol | 78.19 | 79.14 |
| VIT_17s0000g00210.t01 | Wine grape | cytosol | 70.87 | 72.22 |
| Solyc03g118200.2.1 | Tomato | cytosol | 68.82 | 69.66 |
| KRH41052 | Soybean | endoplasmic reticulum | 68.31 | 69.14 |
| KRH54085 | Soybean | cytosol | 66.44 | 67.47 |
| Solyc06g068840.2.1 | Tomato | cytosol | 65.59 | 66.72 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, plastid | 49.57 | 66.44 |
| KRH20017 | Soybean | cytosol | 30.66 | 65.93 |
| KRH63871 | Soybean | cytosol | 65.59 | 61.9 |
| CDY22660 | Canola | cytosol | 58.6 | 59.21 |
| CDY06335 | Canola | cytosol | 57.92 | 58.32 |
| Os02t0521300-01 | Rice | plasma membrane | 57.58 | 57.88 |
| TraesCS6D01G176800.1 | Wheat | cytosol, nucleus, plastid | 55.71 | 56.97 |
| TraesCS6B01G235200.1 | Wheat | plastid | 55.88 | 56.85 |
| TraesCS6A01G189800.1 | Wheat | cytosol | 55.37 | 56.62 |
| KXG30293 | Sorghum | cytosol | 55.37 | 56.23 |
| Zm00001d016615_P002 | Maize | plasma membrane | 51.96 | 56.07 |
| HORVU6Hr1G041140.14 | Barley | mitochondrion | 55.88 | 50.93 |
| CDY27584 | Canola | cytosol | 10.9 | 27.59 |
| CDY50776 | Canola | cytosol | 3.24 | 25.68 |
| CDX99619 | Canola | cytosol | 2.73 | 23.53 |
| CDX84471 | Canola | cytosol, mitochondrion | 13.97 | 22.59 |
| CDY43775 | Canola | cytosol, mitochondrion | 13.97 | 22.34 |
| CDX84957 | Canola | cytosol | 14.65 | 22.34 |
| CDY31343 | Canola | cytosol | 13.8 | 22.07 |
| CDY39835 | Canola | cytosol | 13.8 | 22.07 |
| CDY56212 | Canola | plastid | 16.52 | 22.0 |
| CDY01855 | Canola | cytosol, plastid | 16.35 | 21.77 |
| CDY37509 | Canola | cytosol | 16.87 | 21.52 |
| CDY49066 | Canola | cytosol | 16.87 | 21.52 |
| CDX91935 | Canola | cytosol | 16.52 | 21.23 |
| CDX79314 | Canola | cytosol, plastid | 13.46 | 20.84 |
| CDX85597 | Canola | cytosol, plastid | 16.01 | 20.84 |
| CDX70564 | Canola | cytosol, plastid | 16.7 | 20.81 |
| CDX74310 | Canola | cytosol | 16.18 | 20.74 |
| CDX67997 | Canola | cytosol | 13.29 | 20.63 |
| CDY09854 | Canola | nucleus, plastid | 16.35 | 20.6 |
| CDX69581 | Canola | nucleus, plastid | 16.35 | 20.6 |
| CDX78576 | Canola | cytosol, plastid | 16.52 | 20.59 |
| CDX91062 | Canola | cytosol, plastid | 15.84 | 20.58 |
| CDY52873 | Canola | plastid | 10.56 | 20.26 |
| CDX87387 | Canola | plastid | 13.63 | 19.9 |
| CDX88533 | Canola | plastid | 13.63 | 19.85 |
| CDX85680 | Canola | mitochondrion, plastid | 4.77 | 19.05 |
| CDX72278 | Canola | plastid | 10.9 | 17.25 |
| CDY03984 | Canola | cytosol | 4.43 | 8.75 |
| CDY49067 | Canola | extracellular | 2.21 | 8.67 |
| CDY27585 | Canola | cytosol | 1.53 | 6.92 |
| CDY25816 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:27.2.7 | GO:A0A078EDV0 | InterPro:BONZAI | InterPro:C2B_Copine | InterPro:C2_dom |
| InterPro:C2_domain_sf | EnsemblPlants:CDX98984 | ProteinID:CDX98984 | ProteinID:CDX98984.1 | InterPro:Copine | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005544 | GO:GO:0008150 | GO:GO:0008219 | GO:GO:0008289 | GO:GO:0009987 |
| GO:GO:0060548 | EnsemblPlantsGene:GSBRNA2T00107103001 | InterPro:IPR000008 | InterPro:IPR002035 | InterPro:IPR035892 | InterPro:IPR036465 |
| PFAM:PF00168 | PFAM:PF07002 | PFscan:PS50004 | PFscan:PS50234 | PANTHER:PTHR10857 | PANTHER:PTHR10857:SF108 |
| SMART:SM00239 | SMART:SM00327 | SUPFAM:SSF49562 | SUPFAM:SSF53300 | UniParc:UPI0004EDB264 | InterPro:VWF_A |
| SEG:seg | InterPro:vWFA_dom_sf | : | : | : | : |
Description
BnaC09g48510D
Coordinates
chrLK031907:-:995655..999077
Molecular Weight (calculated)
64071.1 Da
IEP (calculated)
4.948
GRAVY (calculated)
-0.081
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSCWSDGGG GMVGVGGTTS SAAGCYASPN DAVDYYLKSR GFNGLFSQIE LSFSASDLRD RDVISKSDAV VVVYTKGRDG ALAELFRSEV VLNSLNPKWI
101: KKLTLSYQFE AVQTLLFRVY DIDTQFQNSR EEMLNLDEQQ FLGEAKCALS EVITKSNRTI ALELMRKEGA AAAQTRPQSH GKLIIHAEES LASKTTTEIV
201: LRCLNLESKD NFSKSDPFLV ISKMVEHGAP VPVSKTEVLK NDPNPIWKPV FLSVQQVGSK DTPLVIECLD FNGNGNHSLI GKVQKSLADL EKLHVSGQGI
301: NLFLPTGVGH KHEDKALKSQ IFVDKFTETV QHTFLEYLAS GFELNFMVAI DFTASNGNPR LPDSLHYIDP TGRLNAYQRA IVEVGEVLQF YDSDKRFPAW
401: GFGARPIDIP VSHCFNLNGS STYCEVDGIQ GIMNAYNGAL FNVSFAGPTL FGPVINAAAT IASESLAQNA RRYYVLLIIT DGVITDLQET RDALVSASDL
501: PLSILIVGVG GADYKEMEVL DGDKGERLES SSGRVASRDI VQFVALRDIQ YGEVSVVEAL LAELPSQFLA YMKNRNITPT TSTSSAC
101: KKLTLSYQFE AVQTLLFRVY DIDTQFQNSR EEMLNLDEQQ FLGEAKCALS EVITKSNRTI ALELMRKEGA AAAQTRPQSH GKLIIHAEES LASKTTTEIV
201: LRCLNLESKD NFSKSDPFLV ISKMVEHGAP VPVSKTEVLK NDPNPIWKPV FLSVQQVGSK DTPLVIECLD FNGNGNHSLI GKVQKSLADL EKLHVSGQGI
301: NLFLPTGVGH KHEDKALKSQ IFVDKFTETV QHTFLEYLAS GFELNFMVAI DFTASNGNPR LPDSLHYIDP TGRLNAYQRA IVEVGEVLQF YDSDKRFPAW
401: GFGARPIDIP VSHCFNLNGS STYCEVDGIQ GIMNAYNGAL FNVSFAGPTL FGPVINAAAT IASESLAQNA RRYYVLLIIT DGVITDLQET RDALVSASDL
501: PLSILIVGVG GADYKEMEVL DGDKGERLES SSGRVASRDI VQFVALRDIQ YGEVSVVEAL LAELPSQFLA YMKNRNITPT TSTSSAC
001: MGSCWSDGSY AGGGMVGVGG GANSSAATPN DAVDYYLKSR GYNGLFSQIE LSFSASNLRD RDVISKSDAM VVVYTKGRDG TLAELFRSEV VLNSLNPKWI
101: KNFTIGYQFE IVQTLLFRVY DIDTQFQNSK EELLKLDEQQ FLGEATCTLS EVVTKSNRTI ALELMRKEGV AAQTQPQHNG KLIVHAEESL ASKTNTEIVF
201: RGLNLESKDT FSKSDPFLVI SKIVEHGTPI PVSKTEVLKN DPNPLWKPVS LSVQQVGSKD SPLVIECLDF NGNGNHDLIG KVQKSLSDLE KLHLAGQGIN
301: LALPTGVGHK HEDRVLKSQL FVDKFTETVQ HTFLEYLASG FELNFMVAID FTASNGNPRL PDSLHYIDPT GRLNAYQRAI VEVGEVLQFY DSDKRFPAWG
401: FGARPIDIPV SHCFNLNGSS TYCEVDGIQG IMNAYNGALF NVSFAGPTLF GPVINAAATI ASDSLAQSAK KYYVLLIITD GVITDLQETR DSIVSASDLP
501: LSILIVGVGG ADYKEMEVLD GDKGEKLESS SGRIASRDIV QFVALRDIQY GEVSVVEALL AELPTQFLTY MRNRNITPTT TTPSST
101: KNFTIGYQFE IVQTLLFRVY DIDTQFQNSK EELLKLDEQQ FLGEATCTLS EVVTKSNRTI ALELMRKEGV AAQTQPQHNG KLIVHAEESL ASKTNTEIVF
201: RGLNLESKDT FSKSDPFLVI SKIVEHGTPI PVSKTEVLKN DPNPLWKPVS LSVQQVGSKD SPLVIECLDF NGNGNHDLIG KVQKSLSDLE KLHLAGQGIN
301: LALPTGVGHK HEDRVLKSQL FVDKFTETVQ HTFLEYLASG FELNFMVAID FTASNGNPRL PDSLHYIDPT GRLNAYQRAI VEVGEVLQFY DSDKRFPAWG
401: FGARPIDIPV SHCFNLNGSS TYCEVDGIQG IMNAYNGALF NVSFAGPTLF GPVINAAATI ASDSLAQSAK KYYVLLIITD GVITDLQETR DSIVSASDLP
501: LSILIVGVGG ADYKEMEVLD GDKGEKLESS SGRIASRDIV QFVALRDIQY GEVSVVEALL AELPTQFLTY MRNRNITPTT TTPSST
Arabidopsis Description
BON2Protein BONZAI 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5S1W2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.