Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- vacuole 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT2G45760.1 | CDX70026 | AT5G07300.1 | 17631528 |
AT2G45760.1 | CDX78287 | AT5G07300.1 | 17631528 |
AT2G45760.1 | CDX81044 | AT5G07300.1 | 17631528 |
AT2G45760.1 | CDX98983 | AT5G07300.1 | 17631528 |
AT2G45760.1 | CDX98984 | AT5G07300.1 | 17631528 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra000402.1-P | Field mustard | cytosol | 100.0 | 100.0 |
CDX95663 | Canola | cytosol | 96.53 | 96.06 |
CDX74764 | Canola | cytosol | 75.74 | 76.12 |
CDY18902 | Canola | cytosol | 75.25 | 75.62 |
CDY37063 | Canola | cytosol | 74.26 | 73.17 |
CDY27361 | Canola | cytosol | 71.29 | 71.64 |
AT2G45760.1 | Thale cress | cytosol | 71.29 | 69.57 |
CDY42491 | Canola | cytosol | 42.57 | 47.51 |
CDX71760 | Canola | cytosol, mitochondrion | 49.01 | 46.92 |
CDY69632 | Canola | cytosol, mitochondrion | 48.51 | 46.45 |
CDX89102 | Canola | cytosol | 42.08 | 46.2 |
KRH77255 | Soybean | cytosol | 37.13 | 42.86 |
KRH28237 | Soybean | cytosol | 37.13 | 42.61 |
KRH48228 | Soybean | cytosol | 37.62 | 42.46 |
PGSC0003DMT400071403 | Potato | cytosol | 28.22 | 39.86 |
KRH65133 | Soybean | cytosol | 35.15 | 39.44 |
VIT_15s0048g02070.t01 | Wine grape | cytosol | 31.68 | 36.36 |
KRH00634 | Soybean | cytosol | 27.23 | 35.48 |
Solyc01g091590.2.1 | Tomato | cytosol | 32.67 | 34.74 |
KRH48229 | Soybean | cytosol | 25.74 | 31.9 |
KRH00635 | Soybean | cytosol | 27.72 | 31.11 |
KRH65134 | Soybean | cytosol | 27.72 | 30.27 |
KRH65136 | Soybean | cytosol | 24.75 | 28.74 |
KRH48233 | Soybean | cytosol | 24.75 | 27.93 |
KRH65139 | Soybean | cytosol | 24.26 | 26.63 |
KRH65138 | Soybean | cytosol | 21.78 | 26.51 |
KRH48230 | Soybean | cytosol | 20.79 | 22.11 |
KRH48232 | Soybean | cytosol | 17.82 | 22.09 |
KRH48231 | Soybean | cytosol | 19.31 | 20.53 |
KRH65137 | Soybean | cytosol | 18.81 | 19.9 |
KRH65135 | Soybean | mitochondrion | 19.31 | 17.11 |
CDY01978 | Canola | plastid | 3.96 | 4.52 |
CDY51153 | Canola | cytosol | 2.97 | 3.47 |
CDY54055 | Canola | plastid | 2.97 | 3.41 |
Protein Annotations
EnsemblPlants:CDY53895 | EnsemblPlantsGene:GSBRNA2T00011656001 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
InterPro:IPR035892 | PANTHER:PTHR32246 | PANTHER:PTHR32246:SF20 | PFAM:PF00168 | ProteinID:CDY53895 | ProteinID:CDY53895.1 |
SEG:seg | SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI000253FE50 | UniProt:A0A078IS61 | MapMan:27.2.8 |
Description
BnaA03g56970DBnaA03g56970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IS61]
Coordinates
chrLK033247:-:59992..60600
Molecular Weight (calculated)
22023.6 Da
IEP (calculated)
9.787
GRAVY (calculated)
-0.238
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MTYSTMRRSL EIELISAEGL KVDRKPVKRK TFCIVRIDQE SKACKPDELG GSYPVWKDKI EMDMAMNGSV RFISIEVLYK TSGGAEKSVG LAKIPVTDFM
101: GGFAPQGHLN FLSYRLRDDY GDKSGIINVS IMVKPDGNGL KYTSPSMAAP ADYAACSSQA AVAANGQMWR PRTSSSMALT TGYRGRVVVT GVPVWGAYPR
201: SS
101: GGFAPQGHLN FLSYRLRDDY GDKSGIINVS IMVKPDGNGL KYTSPSMAAP ADYAACSSQA AVAANGQMWR PRTSSSMALT TGYRGRVVVT GVPVWGAYPR
201: SS
001: MSYSTFKRSL EIEVISAEGL KVDRKPLKKK TYSVVRIDEK SWASKVDELG GSYPIWKDRF DMEMPINASV RFISIEVYYR TSGSGRDKNV GYAKIPVTDF
101: MGGFAPQGHL NFLSYRLRDE YGDKCGIVNV SIMVKPDGND HKSSLPSSSF AVAPVDYAAC SWQATAAARN NQMWRPRTSS SMVSTAGYGG GRVVTGVPVW
201: CAYQRPS
101: MGGFAPQGHL NFLSYRLRDE YGDKCGIVNV SIMVKPDGND HKSSLPSSSF AVAPVDYAAC SWQATAAARN NQMWRPRTSS SMVSTAGYGG GRVVTGVPVW
201: CAYQRPS
Arabidopsis Description
BAP2BON1-associated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FX0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.