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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 3
  • cytosol 2
  • vacuole 1
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000402.1-P Field mustard cytosol 100.0 100.0
CDX95663 Canola cytosol 96.53 96.06
CDX74764 Canola cytosol 75.74 76.12
CDY18902 Canola cytosol 75.25 75.62
CDY37063 Canola cytosol 74.26 73.17
CDY27361 Canola cytosol 71.29 71.64
AT2G45760.1 Thale cress cytosol 71.29 69.57
CDY42491 Canola cytosol 42.57 47.51
CDX71760 Canola cytosol, mitochondrion 49.01 46.92
CDY69632 Canola cytosol, mitochondrion 48.51 46.45
CDX89102 Canola cytosol 42.08 46.2
KRH77255 Soybean cytosol 37.13 42.86
KRH28237 Soybean cytosol 37.13 42.61
KRH48228 Soybean cytosol 37.62 42.46
PGSC0003DMT400071403 Potato cytosol 28.22 39.86
KRH65133 Soybean cytosol 35.15 39.44
VIT_15s0048g02070.t01 Wine grape cytosol 31.68 36.36
KRH00634 Soybean cytosol 27.23 35.48
Solyc01g091590.2.1 Tomato cytosol 32.67 34.74
KRH48229 Soybean cytosol 25.74 31.9
KRH00635 Soybean cytosol 27.72 31.11
KRH65134 Soybean cytosol 27.72 30.27
KRH65136 Soybean cytosol 24.75 28.74
KRH48233 Soybean cytosol 24.75 27.93
KRH65139 Soybean cytosol 24.26 26.63
KRH65138 Soybean cytosol 21.78 26.51
KRH48230 Soybean cytosol 20.79 22.11
KRH48232 Soybean cytosol 17.82 22.09
KRH48231 Soybean cytosol 19.31 20.53
KRH65137 Soybean cytosol 18.81 19.9
KRH65135 Soybean mitochondrion 19.31 17.11
CDY01978 Canola plastid 3.96 4.52
CDY51153 Canola cytosol 2.97 3.47
CDY54055 Canola plastid 2.97 3.41
Protein Annotations
EnsemblPlants:CDY53895EnsemblPlantsGene:GSBRNA2T00011656001Gene3D:2.60.40.150InterPro:C2_domInterPro:C2_domain_sfInterPro:IPR000008
InterPro:IPR035892PANTHER:PTHR32246PANTHER:PTHR32246:SF20PFAM:PF00168ProteinID:CDY53895ProteinID:CDY53895.1
SEG:segSMART:SM00239SUPFAM:SSF49562UniParc:UPI000253FE50UniProt:A0A078IS61MapMan:27.2.8
Description
BnaA03g56970DBnaA03g56970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IS61]
Coordinates
chrLK033247:-:59992..60600
Molecular Weight (calculated)
22023.6 Da
IEP (calculated)
9.787
GRAVY (calculated)
-0.238
Length
202 amino acids
Sequence
(BLAST)
001: MTYSTMRRSL EIELISAEGL KVDRKPVKRK TFCIVRIDQE SKACKPDELG GSYPVWKDKI EMDMAMNGSV RFISIEVLYK TSGGAEKSVG LAKIPVTDFM
101: GGFAPQGHLN FLSYRLRDDY GDKSGIINVS IMVKPDGNGL KYTSPSMAAP ADYAACSSQA AVAANGQMWR PRTSSSMALT TGYRGRVVVT GVPVWGAYPR
201: SS
Best Arabidopsis Sequence Match ( AT2G45760.1 )
(BLAST)
001: MSYSTFKRSL EIEVISAEGL KVDRKPLKKK TYSVVRIDEK SWASKVDELG GSYPIWKDRF DMEMPINASV RFISIEVYYR TSGSGRDKNV GYAKIPVTDF
101: MGGFAPQGHL NFLSYRLRDE YGDKCGIVNV SIMVKPDGND HKSSLPSSSF AVAPVDYAAC SWQATAAARN NQMWRPRTSS SMVSTAGYGG GRVVTGVPVW
201: CAYQRPS
Arabidopsis Description
BAP2BON1-associated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FX0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.