CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH20017
KRH41052
KRH54085
KRH63871

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45760.1	KRH20017	AT5G07300.1	17631528
AT2G45760.1	KRH41052	AT5G07300.1	17631528
AT2G45760.1	KRH54085	AT5G07300.1	17631528
AT2G45760.1	KRH63871	AT5G07300.1	17631528

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48233	Soybean	cytosol	52.26	45.25
KRH48229	Soybean	cytosol	47.1	44.79
KRH65136	Soybean	cytosol	48.39	43.1
KRH65139	Soybean	cytosol	49.68	41.85
KRH65134	Soybean	cytosol	49.03	41.08
KRH65138	Soybean	cytosol	43.87	40.96
KRH65133	Soybean	cytosol	45.16	38.89
KRH48228	Soybean	cytosol	44.52	38.55
KRH48230	Soybean	cytosol	46.45	37.89
KRH77255	Soybean	cytosol	42.58	37.71
KRH28237	Soybean	cytosol	42.58	37.5
PGSC0003DMT400071403	Potato	cytosol	34.19	37.06
KRH00635	Soybean	cytosol	41.94	36.11
KRH48231	Soybean	cytosol	43.87	35.79
KRH65137	Soybean	cytosol	43.87	35.6
Solyc01g091590.2.1	Tomato	cytosol	41.94	34.21
VIT_15s0048g02070.t01	Wine grape	cytosol	38.71	34.09
KRH48232	Soybean	cytosol	34.19	32.52
KRH65135	Soybean	mitochondrion	45.16	30.7
CDY27361	Canola	cytosol	35.48	27.36
CDY53895	Canola	cytosol	35.48	27.23
Bra000402.1-P	Field mustard	cytosol	35.48	27.23
CDX95663	Canola	cytosol	35.48	27.09
Bra004936.1-P	Field mustard	cytosol	34.84	26.87
Bra014450.1-P	Field mustard	cytosol	29.03	26.63
AT2G45760.1	Thale cress	cytosol	35.48	26.57
CDY18902	Canola	cytosol	34.19	26.37
CDX74764	Canola	cytosol	33.55	25.87
Bra039316.1-P	Field mustard	cytosol	34.19	25.85
CDY37063	Canola	cytosol	34.19	25.85
CDY42491	Canola	cytosol	29.68	25.41
Bra007581.1-P	Field mustard	cytosol	29.68	24.6
CDX89102	Canola	cytosol	29.03	24.46
AT3G61190.2	Thale cress	cytosol	28.39	22.92
CDX71760	Canola	cytosol, mitochondrion	30.32	22.27
CDY69632	Canola	cytosol, mitochondrion	29.68	21.8

Protein Annotations

EMBL:ACUP02011461	EnsemblPlants:KRH00634	EnsemblPlantsGene:GLYMA_18G225300	EntrezGene:100816414	Gene3D:2.60.40.150	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF20	PFAM:PF00168
ProteinID:KRH00634	ProteinID:KRH00634.1	SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI00023D873C
UniProt:I1N3I4	MapMan:27.2.8	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:51349471..51350450

Molecular Weight (calculated)

17049.4 Da

IEP (calculated)

6.766

GRAVY (calculated)

-0.095

Length

155 amino acids

Sequence
(BLAST)

001: MDAKRTLELT VLSLEELHVD WKHAAESLYV VVRAESITSY STGTATESGG NPSWNEKLVV DVPVHARSIT LEVKCKDAPS VKDLGIARIA ISDFLGGGTM
101: APEQCLQFLS YRLRDWEGRR SGVINFSVRV RATEKACSCS GDVVIGVPIL WNRQN

Best Arabidopsis Sequence Match ( AT2G45760.1 )
(BLAST)

001: MSYSTFKRSL EIEVISAEGL KVDRKPLKKK TYSVVRIDEK SWASKVDELG GSYPIWKDRF DMEMPINASV RFISIEVYYR TSGSGRDKNV GYAKIPVTDF
101: MGGFAPQGHL NFLSYRLRDE YGDKCGIVNV SIMVKPDGND HKSSLPSSSF AVAPVDYAAC SWQATAAARN NQMWRPRTSS SMVSTAGYGG GRVVTGVPVW
201: CAYQRPS

Arabidopsis Description

BAP2BON1-associated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.