CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007581.1-P	Field mustard	cytosol	88.63	100.0
CDX71760	Canola	cytosol, mitochondrion	99.53	99.53
AT3G61190.2	Thale cress	cytosol	65.4	71.88
CDY42491	Canola	cytosol	59.24	69.06
CDX89102	Canola	cytosol	59.24	67.93
CDY18902	Canola	cytosol	51.66	54.23
CDX74764	Canola	cytosol	50.24	52.74
CDX95663	Canola	cytosol	47.87	49.75
CDY53895	Canola	cytosol	46.45	48.51
CDY27361	Canola	cytosol	43.6	45.77
CDY37063	Canola	cytosol	43.13	44.39
VIT_15s0048g02070.t01	Wine grape	cytosol	32.7	39.2
KRH48228	Soybean	cytosol	33.18	39.11
KRH77255	Soybean	cytosol	30.81	37.14
PGSC0003DMT400071403	Potato	cytosol	25.12	37.06
KRH28237	Soybean	cytosol	30.81	36.93
KRH65133	Soybean	cytosol	30.81	36.11
Solyc01g091590.2.1	Tomato	cytosol	28.91	32.11
KRH65134	Soybean	cytosol	27.01	30.81
KRH48229	Soybean	cytosol	23.22	30.06
KRH00634	Soybean	cytosol	21.8	29.68
KRH00635	Soybean	cytosol	24.64	28.89
KRH65136	Soybean	cytosol	20.85	25.29
KRH48233	Soybean	cytosol	21.33	25.14
KRH65139	Soybean	cytosol	21.33	24.46
KRH65138	Soybean	cytosol	18.96	24.1
KRH48231	Soybean	cytosol	17.06	18.95
KRH48230	Soybean	cytosol	16.59	18.42
KRH65137	Soybean	cytosol	16.11	17.8
KRH48232	Soybean	cytosol	13.74	17.79
KRH65135	Soybean	mitochondrion	16.59	15.35
CDY01978	Canola	plastid	3.79	4.52
CDY54055	Canola	plastid	3.32	3.98
CDY51153	Canola	cytosol	2.37	2.89

Protein Annotations

EnsemblPlants:CDY69632	EnsemblPlantsGene:GSBRNA2T00089547001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF20	PFAM:PF00168	ProteinID:CDY69632	ProteinID:CDY69632.1
SEG:seg	SUPFAM:SSF49562	UniParc:UPI0004EE7070	UniProt:A0A078JVR1	MapMan:27.2.8	:

Description

BnaAnng31050DBnaAnng31050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVR1]

Coordinates

chrLK039918:+:1775..2410

Molecular Weight (calculated)

23885.8 Da

IEP (calculated)

9.858

GRAVY (calculated)

-0.496

Length

211 amino acids

Sequence
(BLAST)

001: MYILTQKQHM IYIRRTDHPR LYTTMTKTVE IDIRSAEGLK LNRRLLKKKT FAVARIGEKS RPSHLDVSGG SSPTWNCKLE MPMSGTEQFI YIEVLFRTSS
101: GREKKIGEAK IPTSDFMGRY SPEGHLNFLS YRLRDEYGDK CGIVNVSIMV KPYSTDEFKS SSTAMKDYGA CSSQAAETGL WRPRSEPPAI DGYGGRIVTG
201: VPVWCVLQRP T

Best Arabidopsis Sequence Match ( AT3G61190.2 )
(BLAST)

001: MIYFGRSIDN HYTTMMTKTL EIDLRSAEGL KLNRRPIKKK TFAVVKIDEK CRKSNLDESR RSNPTWNYKS EMPINGNEQF IFIEVFYRTG SGHDKKIGEA
101: KIPTNDFMGR YSPEGHLNFL SYRLRDEFGD KCGIVNLSIL VKSDPTRDYG ACSSQAAVTG LWRPRLETAS IDGYGGRTVT GVPVWGLYQR QF

Arabidopsis Description

BAP1BON1-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q941L2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.