Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G45760.1 | CDX70026 | AT5G07300.1 | 17631528 |
| AT2G45760.1 | CDX78287 | AT5G07300.1 | 17631528 |
| AT2G45760.1 | CDX81044 | AT5G07300.1 | 17631528 |
| AT2G45760.1 | CDX98983 | AT5G07300.1 | 17631528 |
| AT2G45760.1 | CDX98984 | AT5G07300.1 | 17631528 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004936.1-P | Field mustard | cytosol | 97.01 | 97.01 |
| CDY18902 | Canola | cytosol | 93.53 | 93.53 |
| CDX95663 | Canola | cytosol | 78.11 | 77.34 |
| CDY53895 | Canola | cytosol | 76.12 | 75.74 |
| AT2G45760.1 | Thale cress | cytosol | 75.12 | 72.95 |
| CDY37063 | Canola | cytosol | 71.14 | 69.76 |
| CDY27361 | Canola | cytosol | 66.17 | 66.17 |
| CDX71760 | Canola | cytosol, mitochondrion | 53.23 | 50.71 |
| CDY69632 | Canola | cytosol, mitochondrion | 52.74 | 50.24 |
| CDX89102 | Canola | cytosol | 45.27 | 49.46 |
| CDY42491 | Canola | cytosol | 44.28 | 49.17 |
| VIT_15s0048g02070.t01 | Wine grape | cytosol | 33.83 | 38.64 |
| PGSC0003DMT400071403 | Potato | cytosol | 26.87 | 37.76 |
| KRH48228 | Soybean | cytosol | 33.33 | 37.43 |
| KRH77255 | Soybean | cytosol | 31.34 | 36.0 |
| KRH28237 | Soybean | cytosol | 31.34 | 35.8 |
| KRH65133 | Soybean | cytosol | 30.85 | 34.44 |
| KRH48229 | Soybean | cytosol | 27.36 | 33.74 |
| KRH00634 | Soybean | cytosol | 25.87 | 33.55 |
| Solyc01g091590.2.1 | Tomato | cytosol | 30.85 | 32.63 |
| KRH65134 | Soybean | cytosol | 29.85 | 32.43 |
| KRH00635 | Soybean | cytosol | 25.87 | 28.89 |
| KRH65136 | Soybean | cytosol | 24.38 | 28.16 |
| KRH48233 | Soybean | cytosol | 23.38 | 26.26 |
| KRH65138 | Soybean | cytosol | 21.39 | 25.9 |
| KRH65139 | Soybean | cytosol | 21.89 | 23.91 |
| KRH48230 | Soybean | cytosol | 19.9 | 21.05 |
| KRH48232 | Soybean | cytosol | 16.42 | 20.25 |
| KRH48231 | Soybean | cytosol | 18.91 | 20.0 |
| KRH65137 | Soybean | cytosol | 17.91 | 18.85 |
| KRH65135 | Soybean | mitochondrion | 17.41 | 15.35 |
| CDY01978 | Canola | plastid | 3.98 | 4.52 |
| CDY51153 | Canola | cytosol | 3.48 | 4.05 |
| CDY54055 | Canola | plastid | 2.49 | 2.84 |
Protein Annotations
| EnsemblPlants:CDX74764 | EnsemblPlantsGene:GSBRNA2T00116734001 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | PANTHER:PTHR32246 | PANTHER:PTHR32246:SF20 | PFAM:PF00168 | ProteinID:CDX74764 | ProteinID:CDX74764.1 |
| SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI0004EF112C | MapMan:27.2.8 | : | : |
Description
BnaA05g05100D
Coordinates
chrLK031802:-:519746..520351
Molecular Weight (calculated)
21980.5 Da
IEP (calculated)
9.352
GRAVY (calculated)
-0.270
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYSTMKHSL EIELISAEGL KVDRKPVKRK TFCIVRIDQK TKVCKLDESG GSCPTWKDKI EMEMPINGSV RFLSIEVLYR TSGGADKNVG FAKIPVTDFM
101: GGFAPQGHLN FLSYRLRDEY GDKSGIVNVS IMVKPDGNNI KYSTPSPLVV ATSDYAACSS QAAVNGQMWR PKTSSSMAVG AGYGGREVTG VPVWCTYRQS
201: S
101: GGFAPQGHLN FLSYRLRDEY GDKSGIVNVS IMVKPDGNNI KYSTPSPLVV ATSDYAACSS QAAVNGQMWR PKTSSSMAVG AGYGGREVTG VPVWCTYRQS
201: S
001: MSYSTFKRSL EIEVISAEGL KVDRKPLKKK TYSVVRIDEK SWASKVDELG GSYPIWKDRF DMEMPINASV RFISIEVYYR TSGSGRDKNV GYAKIPVTDF
101: MGGFAPQGHL NFLSYRLRDE YGDKCGIVNV SIMVKPDGND HKSSLPSSSF AVAPVDYAAC SWQATAAARN NQMWRPRTSS SMVSTAGYGG GRVVTGVPVW
201: CAYQRPS
101: MGGFAPQGHL NFLSYRLRDE YGDKCGIVNV SIMVKPDGND HKSSLPSSSF AVAPVDYAAC SWQATAAARN NQMWRPRTSS SMVSTAGYGG GRVVTGVPVW
201: CAYQRPS
Arabidopsis Description
BAP2BON1-associated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FX0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.