CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH20017
KRH41052
KRH54085
KRH63871

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45760.1	KRH20017	AT5G07300.1	17631528
AT2G45760.1	KRH41052	AT5G07300.1	17631528
AT2G45760.1	KRH54085	AT5G07300.1	17631528
AT2G45760.1	KRH63871	AT5G07300.1	17631528

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48229	Soybean	cytosol	65.41	74.23
KRH00634	Soybean	cytosol	41.08	49.03
KRH65136	Soybean	cytosol	37.84	40.23
KRH00635	Soybean	cytosol	38.38	39.44
KRH48228	Soybean	cytosol	37.84	39.11
KRH65138	Soybean	cytosol	34.59	38.55
KRH48233	Soybean	cytosol	37.3	38.55
KRH65133	Soybean	cytosol	37.3	38.33
KRH77255	Soybean	cytosol	36.22	38.29
VIT_15s0048g02070.t01	Wine grape	cytosol	36.22	38.07
KRH28237	Soybean	cytosol	35.68	37.5
KRH65139	Soybean	cytosol	36.76	36.96
KRH48230	Soybean	cytosol	36.76	35.79
KRH48231	Soybean	cytosol	35.68	34.74
Bra014450.1-P	Field mustard	cytosol	30.27	33.14
KRH65137	Soybean	cytosol	34.05	32.98
PGSC0003DMT400071403	Potato	cytosol	24.32	31.47
CDY42491	Canola	cytosol	30.27	30.94
Solyc01g091590.2.1	Tomato	cytosol	30.81	30.0
Bra007581.1-P	Field mustard	cytosol	30.27	29.95
CDX89102	Canola	cytosol	29.73	29.89
CDX74764	Canola	cytosol	32.43	29.85
CDY18902	Canola	cytosol	31.89	29.35
Bra004936.1-P	Field mustard	cytosol	31.89	29.35
CDY27361	Canola	cytosol	31.35	28.86
CDX95663	Canola	cytosol	31.35	28.57
AT2G45760.1	Thale cress	cytosol	31.35	28.02
Bra039316.1-P	Field mustard	cytosol	30.81	27.8
CDY37063	Canola	cytosol	30.81	27.8
CDY53895	Canola	cytosol	30.27	27.72
Bra000402.1-P	Field mustard	cytosol	30.27	27.72
AT3G61190.2	Thale cress	cytosol	28.65	27.6
CDX71760	Canola	cytosol, mitochondrion	31.35	27.49
KRH65135	Soybean	mitochondrion	33.51	27.19
CDY69632	Canola	cytosol, mitochondrion	30.81	27.01
KRH48232	Soybean	cytosol	23.78	26.99

Protein Annotations

EMBL:ACUP02001314	EnsemblPlants:KRH65134	EnsemblPlantsGene:GLYMA_03G015900	EntrezGene:102669115	Gene3D:2.60.40.150	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF20	ProteinID:KRH65134
ProteinID:KRH65134.1	SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI00023BD59A	UniProt:K7KC77
MapMan:27.2.8	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:1561334..1561891

Molecular Weight (calculated)

19938.7 Da

IEP (calculated)

7.883

GRAVY (calculated)

-0.217

Length

185 amino acids

Sequence
(BLAST)

001: MATKPKTLEL TILSAEGLHV RGKPTPNIKV FAVVRAESIT SHTTAMVTTT TTNGSDNGFQ YLWNEKFWVE LGPRARCVTI EVKCRTETGV VRDVGVARIA
101: VSDFLGGSSV PDHCLQSLCY RLRDWDGREN GVVNFSVRVA PPPTPPPPPP PPPPAEGAEI YCSSSTSGTG VVTGIPVHWN NSIDK

Best Arabidopsis Sequence Match ( AT2G45760.1 )
(BLAST)

001: MSYSTFKRSL EIEVISAEGL KVDRKPLKKK TYSVVRIDEK SWASKVDELG GSYPIWKDRF DMEMPINASV RFISIEVYYR TSGSGRDKNV GYAKIPVTDF
101: MGGFAPQGHL NFLSYRLRDE YGDKCGIVNV SIMVKPDGND HKSSLPSSSF AVAPVDYAAC SWQATAAARN NQMWRPRTSS SMVSTAGYGG GRVVTGVPVW
201: CAYQRPS

Arabidopsis Description

BAP2BON1-associated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.