CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89102	Canola	cytosol	89.5	88.04
AT3G61190.2	Thale cress	cytosol	64.09	60.42
CDX71760	Canola	cytosol, mitochondrion	69.61	59.72
CDY69632	Canola	cytosol, mitochondrion	69.06	59.24
CDY18902	Canola	cytosol	49.72	44.78
CDX74764	Canola	cytosol	49.17	44.28
CDX95663	Canola	cytosol	49.17	43.84
CDY53895	Canola	cytosol	47.51	42.57
CDY27361	Canola	cytosol	44.2	39.8
CDY37063	Canola	cytosol	44.75	39.51
KRH48228	Soybean	cytosol	34.81	35.2
KRH65133	Soybean	cytosol	34.25	34.44
KRH77255	Soybean	cytosol	32.6	33.71
VIT_15s0048g02070.t01	Wine grape	cytosol	32.6	33.52
KRH28237	Soybean	cytosol	32.6	33.52
PGSC0003DMT400071403	Potato	cytosol	24.31	30.77
Solyc01g091590.2.1	Tomato	cytosol	32.04	30.53
KRH65134	Soybean	cytosol	30.94	30.27
KRH48229	Soybean	cytosol	27.07	30.06
KRH00634	Soybean	cytosol	25.41	29.68
KRH00635	Soybean	cytosol	27.62	27.78
KRH48233	Soybean	cytosol	24.31	24.58
KRH65136	Soybean	cytosol	23.2	24.14
KRH65138	Soybean	cytosol	22.1	24.1
KRH65139	Soybean	cytosol	24.31	23.91
KRH48230	Soybean	cytosol	21.55	20.53
KRH65137	Soybean	cytosol	21.55	20.42
KRH48231	Soybean	cytosol	20.44	19.47
KRH65135	Soybean	mitochondrion	20.99	16.67
KRH48232	Soybean	cytosol	14.92	16.56
CDY01978	Canola	plastid	4.97	5.08
CDY54055	Canola	plastid	4.42	4.55
CDY51153	Canola	cytosol	3.31	3.47

Protein Annotations

EnsemblPlants:CDY42491	EnsemblPlantsGene:GSBRNA2T00074927001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF20	PFAM:PF00168	ProteinID:CDY42491	ProteinID:CDY42491.1
SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0004EEBA3D	UniProt:A0A078HXN9	MapMan:27.2.8

Description

BnaC04g21900DBnaC04g21900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXN9]

Coordinates

chrLK032526:-:95532..96077

Molecular Weight (calculated)

20517.7 Da

IEP (calculated)

10.251

GRAVY (calculated)

-0.465

Length

181 amino acids

Sequence
(BLAST)

001: MIYLGRIDPL FYTTMTKTLE IDIRSAEGLK INRRLIKKKK TFAVARIGEK SSRPSSLDDS GGSNPKWNFK SEMPMKGSVQ FISIEVFYRT RCGREKQIGE
101: ARIPATDFMG RYSHEGHLNF LSYRLRDEYG DKCGIVNVSI VVKPHSTETT MFMASSSSET PSIDGYRGRT VTGLPVWRVT T

Best Arabidopsis Sequence Match ( AT3G61190.2 )
(BLAST)

001: MIYFGRSIDN HYTTMMTKTL EIDLRSAEGL KLNRRPIKKK TFAVVKIDEK CRKSNLDESR RSNPTWNYKS EMPINGNEQF IFIEVFYRTG SGHDKKIGEA
101: KIPTNDFMGR YSPEGHLNFL SYRLRDEFGD KCGIVNLSIL VKSDPTRDYG ACSSQAAVTG LWRPRLETAS IDGYGGRTVT GVPVWGLYQR QF

Arabidopsis Description

BAP1BON1-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q941L2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.