CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH20017
KRH41052
KRH54085
KRH63871

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45760.1	KRH20017	AT5G07300.1	17631528
AT2G45760.1	KRH41052	AT5G07300.1	17631528
AT2G45760.1	KRH54085	AT5G07300.1	17631528
AT2G45760.1	KRH63871	AT5G07300.1	17631528

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48231	Soybean	cytosol	80.0	80.0
KRH65137	Soybean	cytosol	74.74	74.35
KRH65135	Soybean	mitochondrion	61.58	51.32
KRH48233	Soybean	cytosol	44.74	47.49
KRH00634	Soybean	cytosol	37.89	46.45
KRH65136	Soybean	cytosol	41.58	45.4
KRH65139	Soybean	cytosol	43.68	45.11
KRH65138	Soybean	cytosol	38.95	44.58
KRH48229	Soybean	cytosol	37.89	44.17
KRH65134	Soybean	cytosol	35.79	36.76
VIT_15s0048g02070.t01	Wine grape	cytosol	32.11	34.66
KRH65133	Soybean	cytosol	32.63	34.44
KRH48232	Soybean	cytosol	28.42	33.13
KRH28237	Soybean	cytosol	30.53	32.95
KRH00635	Soybean	cytosol	31.05	32.78
KRH77255	Soybean	cytosol	30.0	32.57
KRH48228	Soybean	cytosol	30.53	32.4
Solyc01g091590.2.1	Tomato	cytosol	31.58	31.58
PGSC0003DMT400071403	Potato	cytosol	21.58	28.67
Bra014450.1-P	Field mustard	cytosol	20.0	22.49
CDY42491	Canola	cytosol	20.53	21.55
CDX89102	Canola	cytosol	20.53	21.2
Bra000402.1-P	Field mustard	cytosol	22.11	20.79
CDY53895	Canola	cytosol	22.11	20.79
AT2G45760.1	Thale cress	cytosol	22.63	20.77
CDY18902	Canola	cytosol	21.05	19.9
CDX74764	Canola	cytosol	21.05	19.9
CDY27361	Canola	cytosol	21.05	19.9
Bra004936.1-P	Field mustard	cytosol	21.05	19.9
CDX95663	Canola	cytosol	21.05	19.7
Bra039316.1-P	Field mustard	cytosol	21.05	19.51
CDY37063	Canola	cytosol	21.05	19.51
Bra007581.1-P	Field mustard	cytosol	18.42	18.72
AT3G61190.2	Thale cress	cytosol	18.42	18.23
CDX71760	Canola	cytosol, mitochondrion	18.95	17.06
CDY69632	Canola	cytosol, mitochondrion	18.42	16.59

Protein Annotations

EMBL:ACUP02004213	EnsemblPlants:KRH48230	EnsemblPlantsGene:GLYMA_07G076300	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF20	PFAM:PF00168	ProteinID:KRH48230
ProteinID:KRH48230.1	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI00023C6F0E	UniProt:I1KIG5	MapMan:27.2.8

Description

hypothetical protein

Coordinates

chr7:+:6915234..6916077

Molecular Weight (calculated)

20973.8 Da

IEP (calculated)

5.672

GRAVY (calculated)

-0.215

Length

190 amino acids

Sequence
(BLAST)

001: MEAKSHSQTL EITVMSGENI SVDQSSVAAN VYVVVGAESL NSCTTKMVNE DGGVHAWNET FLLDVPSYAR SVTFEVQCKK YKGVRPIGVA RIALSDFLGG
101: NNVVSESVPQ MYCYGLRNWE GRRNGVIHFS VRVVTLGDNL CSETKEEKET KMVNSKETEH EVMGFQVNSK NSNDVVIGIP VRWSYQSAIV

Best Arabidopsis Sequence Match ( AT2G45760.1 )
(BLAST)

001: MSYSTFKRSL EIEVISAEGL KVDRKPLKKK TYSVVRIDEK SWASKVDELG GSYPIWKDRF DMEMPINASV RFISIEVYYR TSGSGRDKNV GYAKIPVTDF
101: MGGFAPQGHL NFLSYRLRDE YGDKCGIVNV SIMVKPDGND HKSSLPSSSF AVAPVDYAAC SWQATAAARN NQMWRPRTSS SMVSTAGYGG GRVVTGVPVW
201: CAYQRPS

Arabidopsis Description

BAP2BON1-associated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.