CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH20017
KRH41052
KRH54085
KRH63871

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45760.1	KRH20017	AT5G07300.1	17631528
AT2G45760.1	KRH41052	AT5G07300.1	17631528
AT2G45760.1	KRH54085	AT5G07300.1	17631528
AT2G45760.1	KRH63871	AT5G07300.1	17631528

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48233	Soybean	cytosol	81.52	83.8
KRH65138	Soybean	cytosol	57.07	63.25
KRH65136	Soybean	cytosol	58.7	62.07
KRH00634	Soybean	cytosol	41.85	49.68
KRH48231	Soybean	cytosol	46.2	44.74
KRH48230	Soybean	cytosol	45.11	43.68
KRH48232	Soybean	cytosol	38.04	42.94
KRH65137	Soybean	cytosol	44.02	42.41
KRH48229	Soybean	cytosol	34.78	39.26
KRH28237	Soybean	cytosol	35.87	37.5
KRH48228	Soybean	cytosol	36.41	37.43
KRH65133	Soybean	cytosol	36.41	37.22
KRH77255	Soybean	cytosol	35.33	37.14
KRH65134	Soybean	cytosol	36.96	36.76
KRH00635	Soybean	cytosol	35.87	36.67
KRH65135	Soybean	mitochondrion	43.48	35.09
VIT_15s0048g02070.t01	Wine grape	cytosol	33.15	34.66
Solyc01g091590.2.1	Tomato	cytosol	34.24	33.16
PGSC0003DMT400071403	Potato	cytosol	25.0	32.17
Bra014450.1-P	Field mustard	cytosol	23.91	26.04
AT2G45760.1	Thale cress	cytosol	28.26	25.12
CDY42491	Canola	cytosol	23.91	24.31
CDY53895	Canola	cytosol	26.63	24.26
Bra000402.1-P	Field mustard	cytosol	26.63	24.26
Bra007581.1-P	Field mustard	cytosol	24.46	24.06
CDX89102	Canola	cytosol	23.91	23.91
Bra039316.1-P	Field mustard	cytosol	26.63	23.9
CDY37063	Canola	cytosol	26.63	23.9
CDY27361	Canola	cytosol	26.09	23.88
CDX95663	Canola	cytosol	26.09	23.65
Bra004936.1-P	Field mustard	cytosol	25.54	23.38
CDY18902	Canola	cytosol	25.54	23.38
CDX74764	Canola	cytosol	23.91	21.89
AT3G61190.2	Thale cress	cytosol	22.83	21.88
CDX71760	Canola	cytosol, mitochondrion	25.0	21.8
CDY69632	Canola	cytosol, mitochondrion	24.46	21.33

Protein Annotations

EMBL:ACUP02001314	EnsemblPlants:KRH65139	EnsemblPlantsGene:GLYMA_03G016400	EntrezGene:100807334	Gene3D:2.60.40.150	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF20	PFAM:PF00168
ProteinID:KRH65139	ProteinID:KRH65139.1	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0002339625	UniProt:I1JKD9
MapMan:27.2.8	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:1597132..1598225

Molecular Weight (calculated)

20450.8 Da

IEP (calculated)

9.366

GRAVY (calculated)

-0.125

Length

184 amino acids

Sequence
(BLAST)

001: MGISTRTLEI TVISCENLHG VKDDAYVVVR AESLNCCTTR RVKVDDGTKK LLSWNQKFLL DMPMHARSIT FEVQCNRFKG SRPLGVARIA ASDFLGGAAL
101: PENRLQVLSY GLRDWEGKRN GVIHFAVRVA ASLKTTEEEC LNMKPAVELV VARKGCGDRI NVGGKRSNEV AVGVPFWWNY PNII

Best Arabidopsis Sequence Match ( AT2G45760.1 )
(BLAST)

001: MSYSTFKRSL EIEVISAEGL KVDRKPLKKK TYSVVRIDEK SWASKVDELG GSYPIWKDRF DMEMPINASV RFISIEVYYR TSGSGRDKNV GYAKIPVTDF
101: MGGFAPQGHL NFLSYRLRDE YGDKCGIVNV SIMVKPDGND HKSSLPSSSF AVAPVDYAAC SWQATAAARN NQMWRPRTSS SMVSTAGYGG GRVVTGVPVW
201: CAYQRPS

Arabidopsis Description

BAP2BON1-associated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.