CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH00634
KRH00635
KRH28237
KRH48228
KRH48229
KRH48230
KRH48231
KRH48232
KRH48233
KRH65133
KRH65134
KRH65135
KRH65136
KRH65137
KRH65138
KRH65139
KRH77255

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07300.1	KRH00634	AT2G45760.1	17631528
AT5G07300.1	KRH00635	AT2G45760.1	17631528
AT5G07300.1	KRH28237	AT2G45760.1	17631528
AT5G07300.1	KRH48228	AT2G45760.1	17631528
AT5G07300.1	KRH48229	AT2G45760.1	17631528
AT5G07300.1	KRH48230	AT2G45760.1	17631528
AT5G07300.1	KRH48231	AT2G45760.1	17631528
AT5G07300.1	KRH48232	AT2G45760.1	17631528
AT5G07300.1	KRH48233	AT2G45760.1	17631528
AT5G07300.1	KRH65133	AT2G45760.1	17631528
AT5G07300.1	KRH65134	AT2G45760.1	17631528
AT5G07300.1	KRH65135	AT2G45760.1	17631528
AT5G07300.1	KRH65136	AT2G45760.1	17631528
AT5G07300.1	KRH65137	AT2G45760.1	17631528
AT5G07300.1	KRH65138	AT2G45760.1	17631528
AT5G07300.1	KRH65139	AT2G45760.1	17631528
AT5G07300.1	KRH77255	AT2G45760.1	17631528

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98983	Canola	cytosol, plastid	58.61	65.31
KRH63871	Soybean	cytosol	97.44	42.77
GSMUA_AchrUn_...	Banana	cytosol, golgi, plastid	64.47	40.18
KRH54085	Soybean	cytosol	80.59	38.06
KRH41052	Soybean	endoplasmic reticulum	76.19	35.86
VIT_17s0000g00210.t01	Wine grape	cytosol	72.16	34.2
Solyc03g118200.2.1	Tomato	cytosol	69.96	32.93
AT5G61900.3	Thale cress	cytosol	68.13	32.18
CDY00235	Canola	cytosol	68.13	32.07
Bra010041.1-P	Field mustard	cytosol	68.13	32.07
CDX86951	Canola	cytosol	67.77	31.9
Bra029301.1-P	Field mustard	cytosol, plastid	67.03	31.5
CDX81044	Canola	cytosol	66.3	30.83
CDX78287	Canola	cytosol	66.3	30.83
Bra005931.1-P	Field mustard	cytosol	66.3	30.83
AT5G07300.1	Thale cress	cytosol	65.93	30.72
CDX98984	Canola	cytosol	65.93	30.66
Solyc06g068840.2.1	Tomato	cytosol	64.47	30.5
CDX70026	Canola	cytosol	65.57	30.39
Bra009273.1-P	Field mustard	cytosol	65.2	30.22
Os02t0521300-01	Rice	plasma membrane	63.0	29.45
TraesCS6A01G189800.1	Wheat	cytosol	60.44	28.75
TraesCS6B01G235200.1	Wheat	plastid	60.44	28.6
TraesCS6D01G176800.1	Wheat	cytosol, nucleus, plastid	60.07	28.57
KXG30293	Sorghum	cytosol	59.34	28.03
Zm00001d016615_P002	Maize	plasma membrane	54.58	27.39
KRH68626	Soybean	cytosol	57.14	26.9
KRH68625	Soybean	cytosol	56.41	26.06
KRG96891	Soybean	cytosol	56.04	25.76
HORVU6Hr1G041140.14	Barley	mitochondrion	60.07	25.47
KRH07106	Soybean	cytosol, plastid	23.08	21.65
KRH43661	Soybean	cytosol	24.91	20.24
KRG94356	Soybean	nucleus	27.84	17.76
KRH63659	Soybean	cytosol, mitochondrion, nucleus, plastid	26.37	16.86
KRH54288	Soybean	cytosol, mitochondrion, nucleus, plastid	26.37	16.82
KRG97516	Soybean	golgi, plasma membrane	28.21	16.78
KRH59243	Soybean	endoplasmic reticulum, golgi	27.84	16.52
KRH43098	Soybean	endoplasmic reticulum, golgi	27.47	16.3
KRH31355	Soybean	golgi, plasma membrane	27.47	16.2
KRH59596	Soybean	nucleus	25.27	16.2
KRH64018	Soybean	nucleus	25.27	15.97
KRH13149	Soybean	cytosol, plastid	24.18	15.83
KRH44829	Soybean	nucleus, plastid	24.18	15.53
KRH58251	Soybean	nucleus	27.47	15.27
KRH53919	Soybean	nucleus	20.51	14.93
KRG93947	Soybean	nucleus	26.74	14.72
KRH40948	Soybean	nucleus	19.05	14.57
KRG95016	Soybean	nucleus, peroxisome, plasma membrane	19.05	14.36
AT5G61910.4	Thale cress	cytosol	68.13	13.82
KRH07102	Soybean	cytosol	4.4	8.57
KRH13151	Soybean	nucleus, vacuole	11.72	5.99
KRH44837	Soybean	extracellular, golgi	9.89	5.23
KRH13085	Soybean	extracellular, vacuole	9.52	4.98
KRH44834	Soybean	plasma membrane	8.06	4.49

Protein Annotations

EntrezGene:100778693	MapMan:27.2.7	EMBL:ACUP02008222	InterPro:BONZAI	InterPro:Copine	EnsemblPlantsGene:GLYMA_13G150400
GO:GO:0003674	GO:GO:0005488	GO:GO:0005544	GO:GO:0008150	GO:GO:0008219	GO:GO:0008289
GO:GO:0009987	GO:GO:0060548	InterPro:IPR036465	UniProt:K7LZV7	EnsemblPlants:KRH20017	ProteinID:KRH20017
ProteinID:KRH20017.1	PFAM:PF07002	PANTHER:PTHR10857	PANTHER:PTHR10857:SF108	SUPFAM:SSF53300	UniParc:UPI000233D061
InterPro:vWFA_dom_sf	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:26376582..26378397

Molecular Weight (calculated)

29644.6 Da

IEP (calculated)

5.314

GRAVY (calculated)

0.116

Length

273 amino acids

Sequence
(BLAST)

001: MVEVQHKFTI TALVEEPGCV LFTLRNHLWV PQNANPLRPL LSGSTAASNG NPRLPDSLHY IDPSGRPNAY QRAIVEVGEV LLLYDSDKRF PTWGFGARPI
101: DGPVSHCFNL NGSSHYCEVE GIQGIMMAYT SALLNVSLAG PTLFGPVIST AALIASQSVA NGGRKYFVLL IITDGVVTDL QETKDAIVKA SDLPLSILIV
201: GVGGADFKEM EVLDADKGER LESSYGRVAS RDIVQFIPFR EVQSGLSVVQ AFLAELPAQF LTYVRSRNIQ PNL

Best Arabidopsis Sequence Match ( AT1G08860.1 )
(BLAST)

001: MGGCLSGDVK GGKQAIGGVQ QRPTSSTIAN NAAHNDAVDF FFRSRGQYPL FSQIELTLSA SNLLDCDITS KSDPMAVMYL RKKDGRLEEI GRTEVILNNL
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI

Arabidopsis Description

BON3Protein BONZAI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XQC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.