CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

nucleus 3
cytosol 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13085	Soybean	extracellular, vacuole	84.3	83.33
KRH44834	Soybean	plasma membrane	67.64	71.22
KRH13151	Soybean	nucleus, vacuole	34.5	33.33
KRH07102	Soybean	cytosol	6.98	25.71
KRH43661	Soybean	cytosol	13.18	20.24
KRH54288	Soybean	cytosol, mitochondrion, nucleus, plastid	13.95	16.82
KRG94356	Soybean	nucleus	13.95	16.82
KRH13149	Soybean	cytosol, plastid	13.57	16.79
KRH44829	Soybean	nucleus, plastid	13.76	16.71
KRH63659	Soybean	cytosol, mitochondrion, nucleus, plastid	13.76	16.63
KRH64018	Soybean	nucleus	13.57	16.2
KRG97516	Soybean	golgi, plasma membrane	14.15	15.9
KRH58251	Soybean	nucleus	15.12	15.89
KRH31355	Soybean	golgi, plasma membrane	14.15	15.77
KRH59243	Soybean	endoplasmic reticulum, golgi	13.95	15.65
KRG93947	Soybean	nucleus	14.92	15.52
KRH59596	Soybean	nucleus	12.79	15.49
KRH43098	Soybean	endoplasmic reticulum, golgi	13.76	15.43
KRH53919	Soybean	nucleus	10.27	14.13
KRG95016	Soybean	nucleus, peroxisome, plasma membrane	9.69	13.81
KRH40948	Soybean	nucleus	9.5	13.73
KRH07106	Soybean	cytosol, plastid	6.78	12.03
KRH20017	Soybean	cytosol	5.23	9.89
KRH41052	Soybean	endoplasmic reticulum	10.66	9.48
KRH54085	Soybean	cytosol	10.27	9.17
KRH63871	Soybean	cytosol	10.66	8.84
KRH68626	Soybean	cytosol	9.88	8.79
KRH68625	Soybean	cytosol	9.3	8.12
KRG96891	Soybean	cytosol	9.3	8.08

Protein Annotations

EntrezGene:100807256	Gene3D:3.30.40.10	Gene3D:3.30.60.180	MapMan:35.2	EMBL:ACUP02004967	ncoils:Coil
EnsemblPlantsGene:GLYMA_08G234500	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
GO:GO:0046872	InterPro:IPR001841	InterPro:IPR002893	InterPro:IPR013083	UniProt:K7L8D4	EnsemblPlants:KRH44837
ProteinID:KRH44837	ProteinID:KRH44837.1	PFAM:PF01753	ScanProsite:PS01360	PFscan:PS50089	PFscan:PS50865
PANTHER:PTHR24202	PANTHER:PTHR24202:SF58	SUPFAM:SSF144232	TMHMM:TMhelix	UniParc:UPI00029608E4	InterPro:Znf_MYND
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:19638244..19647483

Molecular Weight (calculated)

58748.1 Da

IEP (calculated)

6.968

GRAVY (calculated)

-0.483

Length

516 amino acids

Sequence
(BLAST)

001: MLAYWVQYLN ELNLKCVLMI ILMMILPILG LLFSLENKLS LNSKWNEDVQ ISDEINSLFY EQEENITSTA HCACACCFCG RLSIIVTRCS LCKAAIYCSN
101: ACRVKHWTIS HKYECVEIEG SENQHESPSN GTHFLLTEPE NDKYSFCEVE PRKYEGHVYY IEGGENIVEI SDETALKDGC AVCGNPSSKV CSRCKAIKYC
201: SQTCQHFDWR SGHKFQCLVQ KANSTEAAIV NQGRPANGNV VNLTNSNEVQ DDAHSSSPLR LEFYSGKTSS KALIRSSMSQ VATNNGQKKV EDQLRSLEEE
301: LAKIKDENMS LLSERGEWEV RARNSIDRLY SFRKENDHQL LILKHENELM SNAEKQARQM TNSLSQRLHC LQIAVESGVE ERKKQEEYIH MLQNECAKVK
401: IELQEQNKCI KRLTLDLDKT TQFPRRKTEE TRQKLINALS EIAAVESNAN CAEVSQPISL SRNPTFTKQG CSICLANEKN MAFGCGHMTC LECGPKIREC
501: HICRRQITSR IRLFPN

Best Arabidopsis Sequence Match ( AT1G79280.2 )
(BLAST)

0001: MPLFMPDEEL ARLSSDAASV VAERADEYIR KIYAELDSVR AKADAASITA EQTCSLLEQK YLSLSQDFSS LESQNAKLQS DFDDRLAELA QSQAQKHQLH
0101: LQSIEKDGEV ERMSTEMSEL HKSKRQLMEL LEQKDAEISE KNSTIKSYLD KIVKLTDTSS EKEARLAEAT AELARSQAMC SRLSQEKELT ERHAKWLDEE
0201: LTAKVDSYAE LRRRHSDLES EMSAKLVDVE KNYIECSSSL NWHKERLREL ETKIGSLQED LSSCKDAATT TEEQYTAELF TANKLVDLYK ESSEEWSRKA
0301: GELEGVIKAL EARLSQVESS YKERLDKEVS TKQLLEKENG DLKQKLEKCE AEIEKTRKTD ELNLIPFSNF TRRVDNSGTS NMIEESQAVI SKVPAGVSGT
0401: ALAASLLRDG WSLAKIYEKY QEAVDAMRHE QLGRKEAEMI LQRVLSELEE KAGFIQEERG EYERVVEAYC LVNQKLQDSV SEQSNMEKFI MELKADLRRR
0501: ERENTLLQKD ISDLQKQVTI LLKECRDVQL RCGAARDDDE DDYPLLSDVE MEMESEADKI ISEHLLKFKD INGLVEQNVK LRNLVRSLSE QIESRETELK
0601: ETFEVDLKNK TDEASAKVAT VLKRAEEQGQ MIESLHTSVA MYKRLYEEEQ KLHSSDSRSS DLSPAVVPGR KNFLHLLEDS EEATKRAQEK AFERIRILEE
0701: DFAKARSEVI AIRSERDKLA MEANFAREKL EGIMKESERK REEMNSVLAR NIEFSQLIID HQRKLRESSE SLHAAEEISR KLSMEVSVLK QEKELLSNAE
0801: KRASDEVSAL SQRVYRLQAT LDTVQSTEEV REETRAAERR KQEEHIKQLQ REWAEAKKEL QEERSNARDF TSDRNQTLNN AVMQVEEMGK ELANALKAVS
0901: VAESRASVAE ARLSDLEKKI RSSDPKTLDM DSGGIVSLSD KEAALVIILD VVHKIQAGFR IGSAMSIELR TAKEEIEKLR GEVESSKSHM LQYKSIAQVN
1001: ETALKQMESA HENFRLEAEK RQRSLEAELV SLRERVSELE NDCIQKSEQL ATAAAGKEDA LLSASAEIAS LREENLVKKS QIEAMNIQMS TLKNDLETEH
1101: EKWRVAQRNY ERQVILLSET IQELTKTSQA LAALQEEASE LRKLADARGI ENSELNAKWS EEKLMLEQQK NLAEKKYHEL NEQNKLLHSR LEAKHLNSAE
1201: KNSRSGTISS GSTDSDHLED SGLQRVVHYL RRTKEIAETE ISLMRQEKLR LQSQLESALK MAESARGSLT AERASTRASL LTDDGIKSLQ LQVSEMNLLR
1301: ESNMQLREEN KHNFEKCQEM REVAQKARME SENFENLLKT KQTELDLCMK EMEKLRMETD LHKKRVDELR ETYRNIDIAD YNRLKDEVRQ LEEKLKAKDA
1401: HAEDCKKVLL EKQNKISLLE KELTNCKKDL SEREKRLDDA QQAQATMQSE FNKQKQELEK NKKIHYTLNM TKRKYEKEKD ELSKQNQSLA KQLEEAKEEA
1501: GKRTTTDAVV EQSVKEREEK EKRIQILDKY VHQLKDEVRK KTEDLKKKDE ELTKERSERK SVEKEVGDSL TKIKKEKTKV DEELAKLERY QTALTHLSEE
1601: LEKLKHADGN LPEGTSAVQV LSGSILNDQA AAYVSAVEYF ERVARSIASN SQVSTKPTDM VTEPSSGIPA AEPSTMTRVP SSTPLIKSPV ATTQQLPKVA
1701: SDNKEKRLIS QKPSTEFRRP SGRRIVRPQL VKPEESPKVD VDMPEAEGTG DEGKQPAAHE PESQVTTSVR PVQTLVRKRQ ADSLVSEPQQ DSLTQGETSS
1801: EIAPPASKKA KGSESHPDTS EGENLAKEPA IDELMDATTT TDGDNEETEA ENAEEKTEEY VEAQQDNEAD EPVEESPTET ETIPTEEESR DQTEEENQEP
1901: LTDMESDKEE GELDLDTLED LEEGTDVASM MRSPEKEEVQ PETLATPTQS PSRMETAMEE AETTIETPVE DDKTDEGGDA AEEAADIPNN ANDQQEAPET
2001: DIKPETSAAT TSPVSTAPTT SSTLASAITS SGAPETEDPK RAPSPGGGSS TIVTLADRAQ MKRRERIANI VVSRAPNPAT RGARGRTVNL RGGGRLLPRG
2101: GRAPRGGRGQ SPSPP

Arabidopsis Description

NUAnuclear pore anchor [Source:TAIR;Acc:AT1G79280]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.