CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59243	Soybean	endoplasmic reticulum, golgi	94.57	94.57
KRG97516	Soybean	golgi, plasma membrane	78.04	78.21
KRH31355	Soybean	golgi, plasma membrane	77.83	77.32
VIT_01s0137g00460.t01	Wine grape	nucleus	72.17	75.11
KRH07106	Soybean	cytosol, plastid	44.78	70.79
CDY27584	Canola	cytosol	35.43	70.26
KRH54288	Soybean	cytosol, mitochondrion, nucleus, plastid	65.22	70.09
KRH63659	Soybean	cytosol, mitochondrion, nucleus, plastid	65.0	70.02
Bra032793.1-P	Field mustard	nucleus	57.83	69.63
CDX84957	Canola	cytosol	58.26	69.61
Bra004260.1-P	Field mustard	plastid	64.57	67.35
CDY01855	Canola	cytosol, plastid	64.35	67.12
KRH43661	Soybean	cytosol	48.91	66.96
CDY56212	Canola	plastid	64.13	66.89
KRG94356	Soybean	nucleus	61.96	66.59
AT1G67800.2	Thale cress	plasma membrane	64.35	65.34
EES04073	Sorghum	nucleus	64.78	64.92
Zm00001d048784_P001	Maize	cytosol	42.83	63.96
Os01t0908700-01	Rice	plasma membrane, plastid	61.96	63.9
GSMUA_Achr8P01300_001	Banana	nucleus	60.0	63.59
Zm00001d042437_P005	Maize	cytosol	64.35	62.71
GSMUA_Achr9P29460_001	Banana	nucleus	63.7	62.61
TraesCS3B01G449200.1	Wheat	cytosol	63.26	62.31
TraesCS3D01G408900.1	Wheat	cytosol	63.04	62.23
TraesCS5B01G111900.1	Wheat	cytosol	32.17	61.41
KRH58251	Soybean	nucleus	65.22	61.1
KRG93947	Soybean	nucleus	65.43	60.69
GSMUA_Achr6P06710_001	Banana	nucleus	60.65	60.65
TraesCS3A01G414400.2	Wheat	cytosol	55.22	58.26
Zm00001d012101_P002	Maize	mitochondrion	63.91	57.87
KRH07102	Soybean	cytosol	17.61	57.86
KRH59596	Soybean	nucleus	51.09	55.16
KRH13149	Soybean	cytosol, plastid	49.78	54.92
KRH44829	Soybean	nucleus, plastid	50.65	54.82
CDY27585	Canola	cytosol	15.22	53.85
KRH64018	Soybean	nucleus	49.57	52.78
Os12t0288400-01	Rice	endoplasmic reticulum, extracellular, vacuole	61.3	51.65
TraesCS5D01G122000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	60.0	51.4
Zm00001d041073_P001	Maize	endoplasmic reticulum, golgi, vacuole	60.22	51.2
HORVU5Hr1G039100.3	Barley	endoplasmic reticulum, extracellular, golgi	59.78	51.02
HORVU3Hr1G092250.6	Barley	plastid	60.65	50.27
KRG95016	Soybean	nucleus, peroxisome, plasma membrane	39.13	49.72
KRH40948	Soybean	nucleus	38.26	49.3
TraesCS5A01G103800.2	Wheat	endoplasmic reticulum, extracellular, golgi	59.35	48.84
OQU79014	Sorghum	plastid	54.57	47.45
KRH53919	Soybean	nucleus	35.0	42.93
KRH20017	Soybean	cytosol	16.3	27.47
KRH41052	Soybean	endoplasmic reticulum	21.96	17.41
KRH68626	Soybean	cytosol	21.52	17.07
KRH54085	Soybean	cytosol	21.3	16.95
KRH68625	Soybean	cytosol	21.74	16.92
KRG96891	Soybean	cytosol	21.74	16.84
KRH63871	Soybean	cytosol	21.74	16.08
KRH44837	Soybean	extracellular, golgi	15.43	13.76
KRH13085	Soybean	extracellular, vacuole	15.22	13.41
KRH44834	Soybean	plasma membrane	13.26	12.45
KRH13151	Soybean	nucleus, vacuole	14.35	12.36

Protein Annotations

EntrezGene:100800161	MapMan:19.2.2.1.5.3.2	MapMan:19.2.2.1.6.2	Gene3D:3.30.40.10	UniProt:A0A0R0IR54	EMBL:ACUP02004847
InterPro:Copine	EnsemblPlantsGene:GLYMA_08G130800	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083	InterPro:IPR036465
ProteinID:KRH43097.1	EnsemblPlants:KRH43098	ProteinID:KRH43098	ProteinID:KRH43098.1	PFAM:PF07002	PFAM:PF13920
PFscan:PS50089	PANTHER:PTHR10857	PANTHER:PTHR10857:SF28	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850
SignalP:SignalP-noTM	UniParc:UPI0003DEAA66	InterPro:VWF_A	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg
InterPro:vWFA_dom_sf	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:10035545..10040443

Molecular Weight (calculated)

51233.0 Da

IEP (calculated)

6.160

GRAVY (calculated)

-0.418

Length

460 amino acids

Sequence
(BLAST)

001: MLLELETWTA LVFLFLLVLI LKESIMGGKS SKGSERRHVS SYGSAGSSSS WDDYEYPQSP NAYPQQNPYH TPLHHRAPAP FHDYSQPKRK LDRRYSRIAD
101: DYHSLDEVTT ALSHAGLESS NLIVGIDFTK SNEWTGKRSF NRKSLHHIGS GQNPYEQAIS IIGKTLSVFD EDNLIPCFGF GDASTHDQDV FSFHSDERFC
201: NGFEEVLSRY RDIVPRLRLA GPTSFAPIIE MAMTIVEQSG GQYHVLLIIA DGQVTRSVDT QHGQLSPQEE KTIGAIVKAS GYPLSIVLVG VGDGPWDMMR
301: EFDDNIPARA FDNFQFVNFT EIMSKGIDSS RKETEFALSA LMEIPSQYKA TIDLGILGSA RRGHSPDRVP LPPPHYERAS SSSTTSFRSN SFQHSTPTYD
401: NVNAESSSRS SYDNKVCPIC LTNGKDMAFG CGHQTCCDCG ENLECCPICR STITTRIKLY

Best Arabidopsis Sequence Match ( AT1G67800.2 )
(BLAST)

001: MLEVLQAIVL FILFWVWLSW MGGSSSKESP RGGGSGRRYE RSVSGSSSYS SAWDQSSYYQ TPNHPSASPV SSYNSGRQTP KNLERKYSRI ADNYRSIDEV
101: TAALSHAGLE SSNLIVGIDV TKSNEWTGAR SFGRKSLHFI GTTPNPYQQA ISIIGKTLSV FDEDNLIPCY GFGDATTHDQ DVFSFNPNDT YCNGFEEVLM
201: CYREIVPQLR LSGPTSFAPI IERAMTIVEE SGGQYHVLLI IADGQVTRSV DTDNGGFSPQ EQQTIDAIVR ASEYPLSIVL VGVGDGPWDT MRQFDDNIPA
301: RAFDNFQFVN FTDIMSKNID PARKEAEFAL SALMEIPSQY KATLELGLLG QRTGHCPDRI ALPPPTYATQ SMRNSPRTSR STSFQNKPYD NGVSSTPPST
401: THNESQQQFC PVCLVSAKNM AFNCGHQTCA GCGEDLHVCP ICRSSISVRI KLY

Arabidopsis Description

Copine (Calcium-dependent phospholipid-binding protein) family [Source:UniProtKB/TrEMBL;Acc:F4HTR6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.