Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P29460_001 | Banana | nucleus | 76.04 | 70.51 |
| Os01t0908700-01 | Rice | plasma membrane, plastid | 70.51 | 68.61 |
| EES04073 | Sorghum | nucleus | 71.43 | 67.54 |
| GSMUA_Achr2P05470_001 | Banana | nucleus | 57.14 | 66.31 |
| Zm00001d048784_P001 | Maize | cytosol | 47.0 | 66.23 |
| TraesCS3D01G408900.1 | Wheat | cytosol | 70.97 | 66.09 |
| TraesCS3B01G449200.1 | Wheat | cytosol | 70.51 | 65.52 |
| CDX84957 | Canola | cytosol | 58.06 | 65.45 |
| CDY27584 | Canola | cytosol | 34.79 | 65.09 |
| Zm00001d042437_P005 | Maize | cytosol | 70.74 | 65.04 |
| Bra032793.1-P | Field mustard | nucleus | 56.91 | 64.66 |
| VIT_17s0000g09640.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 63.13 | 63.28 |
| TraesCS3A01G414400.2 | Wheat | cytosol | 63.36 | 63.07 |
| VIT_01s0137g00460.t01 | Wine grape | nucleus | 64.06 | 62.9 |
| KRG94356 | Soybean | nucleus | 61.98 | 62.85 |
| GSMUA_Achr6P06710_001 | Banana | nucleus | 65.9 | 62.17 |
| KRH63659 | Soybean | cytosol, mitochondrion, nucleus, plastid | 60.83 | 61.83 |
| KRH54288 | Soybean | cytosol, mitochondrion, nucleus, plastid | 59.91 | 60.75 |
| Zm00001d012101_P002 | Maize | mitochondrion | 70.97 | 60.63 |
| KRH43098 | Soybean | endoplasmic reticulum, golgi | 63.59 | 60.0 |
| Solyc03g111870.2.1 | Tomato | nucleus | 60.37 | 59.95 |
| KRG97516 | Soybean | golgi, plasma membrane | 63.36 | 59.91 |
| GSMUA_Achr7P20180_001 | Banana | cytosol, nucleus, plastid | 24.65 | 59.78 |
| CDX91935 | Canola | cytosol | 62.9 | 59.74 |
| Bra039105.1-P | Field mustard | nucleus | 62.44 | 59.43 |
| CDX74310 | Canola | cytosol | 62.67 | 59.39 |
| Bra000997.1-P | Field mustard | nucleus | 62.67 | 59.39 |
| Solyc02g093520.2.1 | Tomato | nucleus | 67.28 | 59.35 |
| CDY49066 | Canola | cytosol | 62.9 | 59.35 |
| KRH59243 | Soybean | endoplasmic reticulum, golgi | 62.67 | 59.13 |
| CDY37509 | Canola | cytosol | 62.67 | 59.13 |
| CDX91062 | Canola | cytosol, plastid | 61.52 | 59.07 |
| CDY09854 | Canola | nucleus, plastid | 63.36 | 59.01 |
| CDX69581 | Canola | nucleus, plastid | 63.36 | 59.01 |
| Bra008758.1-P | Field mustard | nucleus | 63.36 | 59.01 |
| GSMUA_Achr9P12830_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 55.53 | 58.92 |
| VIT_14s0066g00290.t01 | Wine grape | mitochondrion | 62.21 | 58.57 |
| Bra023465.1-P | Field mustard | cytosol, plastid | 60.83 | 58.54 |
| CDX85597 | Canola | cytosol, plastid | 60.83 | 58.54 |
| KRH31355 | Soybean | golgi, plasma membrane | 62.44 | 58.53 |
| CDY01855 | Canola | cytosol, plastid | 59.45 | 58.5 |
| Bra004260.1-P | Field mustard | plastid | 59.22 | 58.28 |
| CDY56212 | Canola | plastid | 58.99 | 58.05 |
| AT5G14420.2 | Thale cress | nucleus, plastid | 62.44 | 57.91 |
| CDX70564 | Canola | cytosol, plastid | 62.67 | 57.75 |
| PGSC0003DMT400032842 | Potato | mitochondrion | 64.29 | 57.41 |
| CDX78576 | Canola | cytosol, plastid | 62.21 | 57.32 |
| GSMUA_Achr7P03440_001 | Banana | cytosol | 41.24 | 57.19 |
| Bra006253.1-P | Field mustard | nucleus, plastid | 61.98 | 57.11 |
| GSMUA_Achr10P... | Banana | nucleus | 49.77 | 56.54 |
| GSMUA_Achr4P09310_001 | Banana | endoplasmic reticulum, golgi | 47.93 | 56.37 |
| AT1G67800.2 | Thale cress | plasma membrane | 58.76 | 56.29 |
| KRH58251 | Soybean | nucleus | 63.59 | 56.21 |
| GSMUA_Achr5P25930_001 | Banana | extracellular | 30.65 | 56.12 |
| KRG93947 | Soybean | nucleus | 64.06 | 56.05 |
| AT3G01650.2 | Thale cress | cytosol | 62.9 | 55.83 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 52.77 | 55.05 |
| CDY27585 | Canola | cytosol | 15.9 | 53.08 |
| HORVU3Hr1G092250.6 | Barley | plastid | 67.28 | 52.61 |
| GSMUA_Achr5P25940_001 | Banana | cytosol | 24.65 | 49.31 |
| KRG95016 | Soybean | nucleus, peroxisome, plasma membrane | 40.32 | 48.34 |
| AT1G24545.1 | Thale cress | cytosol | 19.12 | 45.6 |
| PGSC0003DMT400039186 | Potato | cytosol | 59.91 | 27.08 |
| GSMUA_AchrUn_... | Banana | cytosol | 9.91 | 23.12 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, plastid | 19.35 | 19.18 |
| GSMUA_Achr5P08050_001 | Banana | cytosol | 20.05 | 14.65 |
Protein Annotations
| MapMan:19.2.2.1.5.3.2 | MapMan:19.2.2.1.6.2 | Gene3D:3.30.40.10 | InterPro:Copine | EnsemblPlantsGene:GSMUA_Achr8G01300_001 | EnsemblPlants:GSMUA_Achr8P01300_001 |
| EnsemblPlants:GSMUA_Achr8T01300_001 | InterPro:IPR001841 | InterPro:IPR002035 | InterPro:IPR013083 | InterPro:IPR036465 | UniProt:M0TLN2 |
| PFAM:PF07002 | PFAM:PF13920 | PFscan:PS50089 | PANTHER:PTHR10857 | PANTHER:PTHR10857:SF28 | SMART:SM00184 |
| SMART:SM00327 | SUPFAM:SSF53300 | SUPFAM:SSF57850 | UniParc:UPI0002958342 | InterPro:VWF_A | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | InterPro:vWFA_dom_sf | : | : | : |
Description
E3 ubiquitin-protein ligase RGLG1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G01300_001]
Coordinates
chr8:-:1099030..1103486
Molecular Weight (calculated)
48165.3 Da
IEP (calculated)
5.056
GRAVY (calculated)
-0.507
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAGSSRDSE ERERGSFQDW DRRGYSREVP EYRSYPPPPQ TYDPPSESYP PPGSRPRPTI DRRYSRISDN YHTLEQVTEA LAQAGLESSN LIVGIDLTKS
101: NEWTGKFSFG GRSLHHIGDT PNPYEQAISI IGRTLSAFDE DNLIPCFGFG DASTHDRDVF SFCPDGRPCN GFQDTLVQYR ELLPHLRLAG PTSFAPIIEM
201: AMTIVEQSGG QYHVLLIIAD GQVTRSVDTQ FGHLSSQEQN TVDAIVKASE FPLSIILVGV GDGPWDMMKE FDDNIPARSF DNFQFVNFTE IMSKNIPQTR
301: KEALFALEAL MEIPSQYKAT IEMGILGRRS GKSPQTIALP PPTGNHHAPS VGYTNYKSTT FQQSAPPYPG YETASSEHPS APSSSFEDQV CPICLTNPRD
401: MAFGCGHLTC SDCGPSLQTC PICRREIHTR IKLY
101: NEWTGKFSFG GRSLHHIGDT PNPYEQAISI IGRTLSAFDE DNLIPCFGFG DASTHDRDVF SFCPDGRPCN GFQDTLVQYR ELLPHLRLAG PTSFAPIIEM
201: AMTIVEQSGG QYHVLLIIAD GQVTRSVDTQ FGHLSSQEQN TVDAIVKASE FPLSIILVGV GDGPWDMMKE FDDNIPARSF DNFQFVNFTE IMSKNIPQTR
301: KEALFALEAL MEIPSQYKAT IEMGILGRRS GKSPQTIALP PPTGNHHAPS VGYTNYKSTT FQQSAPPYPG YETASSEHPS APSSSFEDQV CPICLTNPRD
401: MAFGCGHLTC SDCGPSLQTC PICRREIHTR IKLY
001: MGGGNSKEES SSPSSSSWAS HQSYPQYGPD SYNYPPPPTY APAPSPAPAP APVPAPSPAS SYGPQYSQEG YASQPNNPPP PTYAPAPSPA SSYGHQYSQE
101: GYASAASQPN YPPPPSQSQV ADRKKFDRRY SKISDNYSSL LQVSEALGRA GLESSNLIVG IDFTKSNEWT GAKSFNRKSL HHLSNTPNPY EQAITIIGRT
201: LAAFDEDNLI PCYGFGDAST HDQDVFSFYP EGRFCNGFEE VLARYREIVP QLKLAGPTSF APIIEMAMTV VEQSSGQYHV LVIIADGQVT RSVDTEHGRL
301: SPQEQKTVDA IVKASTLPLS IVLVGVGDGP WDMMQEFDDN IPARAFDNFQ FVNFTEIMSK NKDQSRKETE FALSALMEIP PQYKATIELN LLGVRNGNIP
401: QRIPLPPPVQ SGSSFSSSRI PNFEPSVPPY PFESKQMSSA DDIQLCPICL SNPKNMAFGC GHQTCCECGP DLKVCPICRA PIQTRIKLY
101: GYASAASQPN YPPPPSQSQV ADRKKFDRRY SKISDNYSSL LQVSEALGRA GLESSNLIVG IDFTKSNEWT GAKSFNRKSL HHLSNTPNPY EQAITIIGRT
201: LAAFDEDNLI PCYGFGDAST HDQDVFSFYP EGRFCNGFEE VLARYREIVP QLKLAGPTSF APIIEMAMTV VEQSSGQYHV LVIIADGQVT RSVDTEHGRL
301: SPQEQKTVDA IVKASTLPLS IVLVGVGDGP WDMMQEFDDN IPARAFDNFQ FVNFTEIMSK NKDQSRKETE FALSALMEIP PQYKATIELN LLGVRNGNIP
401: QRIPLPPPVQ SGSSFSSSRI PNFEPSVPPY PFESKQMSSA DDIQLCPICL SNPKNMAFGC GHQTCCECGP DLKVCPICRA PIQTRIKLY
Arabidopsis Description
RGLG1E3 ubiquitin-protein ligase RGLG1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS90]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.