Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 6
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRG97516 | Soybean | golgi, plasma membrane | 95.46 | 96.3 |
KRH43098 | Soybean | endoplasmic reticulum, golgi | 77.32 | 77.83 |
KRH59243 | Soybean | endoplasmic reticulum, golgi | 76.46 | 76.96 |
VIT_01s0137g00460.t01 | Wine grape | nucleus | 69.33 | 72.62 |
CDY27584 | Canola | cytosol | 34.99 | 69.83 |
Bra032793.1-P | Field mustard | nucleus | 56.59 | 68.59 |
CDX84957 | Canola | cytosol | 56.8 | 68.31 |
KRH54288 | Soybean | cytosol, mitochondrion, nucleus, plastid | 62.63 | 67.76 |
KRH63659 | Soybean | cytosol, mitochondrion, nucleus, plastid | 61.99 | 67.21 |
Bra004260.1-P | Field mustard | plastid | 63.5 | 66.67 |
KRH07106 | Soybean | cytosol, plastid | 41.9 | 66.67 |
CDY01855 | Canola | cytosol, plastid | 63.28 | 66.44 |
CDY56212 | Canola | plastid | 62.85 | 65.99 |
AT1G67800.2 | Thale cress | plasma membrane | 63.5 | 64.9 |
KRH43661 | Soybean | cytosol | 46.87 | 64.58 |
KRG94356 | Soybean | nucleus | 59.18 | 64.02 |
GSMUA_Achr8P01300_001 | Banana | nucleus | 58.53 | 62.44 |
Zm00001d048784_P001 | Maize | cytosol | 41.04 | 61.69 |
Os01t0908700-01 | Rice | plasma membrane, plastid | 58.75 | 60.99 |
GSMUA_Achr9P29460_001 | Banana | nucleus | 61.34 | 60.68 |
EES04073 | Sorghum | nucleus | 60.04 | 60.57 |
KRH07102 | Soybean | cytosol | 18.14 | 60.0 |
KRH58251 | Soybean | nucleus | 63.5 | 59.88 |
KRG93947 | Soybean | nucleus | 63.71 | 59.48 |
TraesCS3B01G449200.1 | Wheat | cytosol | 59.83 | 59.31 |
TraesCS3D01G408900.1 | Wheat | cytosol | 59.61 | 59.23 |
Zm00001d042437_P005 | Maize | cytosol | 60.26 | 59.11 |
TraesCS5B01G111900.1 | Wheat | cytosol | 30.24 | 58.09 |
GSMUA_Achr6P06710_001 | Banana | nucleus | 57.24 | 57.61 |
TraesCS3A01G414400.2 | Wheat | cytosol | 52.27 | 55.5 |
Zm00001d012101_P002 | Maize | mitochondrion | 59.4 | 54.13 |
CDY27585 | Canola | cytosol | 15.12 | 53.85 |
KRH59596 | Soybean | nucleus | 49.24 | 53.52 |
KRH13149 | Soybean | cytosol, plastid | 47.73 | 53.0 |
KRH44829 | Soybean | nucleus, plastid | 48.16 | 52.47 |
KRH64018 | Soybean | nucleus | 47.73 | 51.16 |
TraesCS5D01G122000.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 57.45 | 49.53 |
HORVU5Hr1G039100.3 | Barley | endoplasmic reticulum, extracellular, golgi | 57.02 | 48.98 |
Os12t0288400-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 57.67 | 48.9 |
Zm00001d041073_P001 | Maize | endoplasmic reticulum, golgi, vacuole | 57.02 | 48.8 |
KRG95016 | Soybean | nucleus, peroxisome, plasma membrane | 38.01 | 48.62 |
KRH40948 | Soybean | nucleus | 37.37 | 48.46 |
HORVU3Hr1G092250.6 | Barley | plastid | 57.24 | 47.75 |
TraesCS5A01G103800.2 | Wheat | endoplasmic reticulum, extracellular, golgi | 57.02 | 47.23 |
OQU79014 | Sorghum | plastid | 51.84 | 45.37 |
KRH53919 | Soybean | nucleus | 34.13 | 42.13 |
KRH20017 | Soybean | cytosol | 16.2 | 27.47 |
KRH41052 | Soybean | endoplasmic reticulum | 22.25 | 17.76 |
KRH54085 | Soybean | cytosol | 21.81 | 17.47 |
KRH68626 | Soybean | cytosol | 21.81 | 17.41 |
KRH68625 | Soybean | cytosol | 21.81 | 17.09 |
KRG96891 | Soybean | cytosol | 21.38 | 16.67 |
KRH63871 | Soybean | cytosol | 22.25 | 16.56 |
KRH13085 | Soybean | extracellular, vacuole | 15.98 | 14.18 |
KRH44837 | Soybean | extracellular, golgi | 15.77 | 14.15 |
KRH44834 | Soybean | plasma membrane | 13.39 | 12.65 |
KRH13151 | Soybean | nucleus, vacuole | 13.17 | 11.42 |
Protein Annotations
EntrezGene:100820356 | MapMan:19.2.2.1.5.3.2 | MapMan:19.2.2.1.6.2 | Gene3D:3.30.40.10 | EMBL:ACUP02007141 | InterPro:Copine |
EnsemblPlantsGene:GLYMA_11G244000 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | UniProt:I1LNF5 | InterPro:IPR001841 |
InterPro:IPR002035 | InterPro:IPR013083 | InterPro:IPR036465 | EnsemblPlants:KRH31355 | ProteinID:KRH31355 | ProteinID:KRH31355.1 |
PFAM:PF07002 | PFAM:PF13920 | PFscan:PS50089 | PANTHER:PTHR10857 | PANTHER:PTHR10857:SF28 | SMART:SM00327 |
SUPFAM:SSF53300 | SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI000233C269 | InterPro:VWF_A | InterPro:Znf_RING |
InterPro:Znf_RING/FYVE/PHD | SEG:seg | InterPro:vWFA_dom_sf | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:33776247..33780260
Molecular Weight (calculated)
51539.7 Da
IEP (calculated)
6.433
GRAVY (calculated)
-0.348
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MHLELETWTI LVAIVCILVF LLKEFVMGGK SSKGSGRRYD FGASSSSRDN SYGGYPPQSP YTSYQTPQHP CASASASAPF YDYAQPKRKL DKKYSRIADN
101: YRSLDEVTAA LANAGLESSN LIVGIDFTKS NEWTGKRSFN RKSLHDIRSG QNPYEQAISI IGKTLSAFDE DNLIPCFGFG DASTHDQDVF SFFSEERFCN
201: GFEEVLTRYR QIIPSLKLAG PTSFAPIIEM AMTIVEQSGG QYHVLLIIAD GQVTRSVDTQ HGNLSPQELN TINAIVKASE YPLSIVLVGV GDGPWEMMRE
301: FDDNIPSRVF DNFQFVNFTE IMRRNVDPAR KETDFSLSAL MEIPSQYKAT LELGILGSRR GHSPDRVALP PPLYSRTSSS ISTKSTRSNS FQQRTPTHTS
401: YDSGVHTETS SSSLYDNKVC PICLTNAKDM AFGCGHQTCC ECGEDLQFCP ICRSTIHTRI RLY
101: YRSLDEVTAA LANAGLESSN LIVGIDFTKS NEWTGKRSFN RKSLHDIRSG QNPYEQAISI IGKTLSAFDE DNLIPCFGFG DASTHDQDVF SFFSEERFCN
201: GFEEVLTRYR QIIPSLKLAG PTSFAPIIEM AMTIVEQSGG QYHVLLIIAD GQVTRSVDTQ HGNLSPQELN TINAIVKASE YPLSIVLVGV GDGPWEMMRE
301: FDDNIPSRVF DNFQFVNFTE IMRRNVDPAR KETDFSLSAL MEIPSQYKAT LELGILGSRR GHSPDRVALP PPLYSRTSSS ISTKSTRSNS FQQRTPTHTS
401: YDSGVHTETS SSSLYDNKVC PICLTNAKDM AFGCGHQTCC ECGEDLQFCP ICRSTIHTRI RLY
001: MLEVLQAIVL FILFWVWLSW MGGSSSKESP RGGGSGRRYE RSVSGSSSYS SAWDQSSYYQ TPNHPSASPV SSYNSGRQTP KNLERKYSRI ADNYRSIDEV
101: TAALSHAGLE SSNLIVGIDV TKSNEWTGAR SFGRKSLHFI GTTPNPYQQA ISIIGKTLSV FDEDNLIPCY GFGDATTHDQ DVFSFNPNDT YCNGFEEVLM
201: CYREIVPQLR LSGPTSFAPI IERAMTIVEE SGGQYHVLLI IADGQVTRSV DTDNGGFSPQ EQQTIDAIVR ASEYPLSIVL VGVGDGPWDT MRQFDDNIPA
301: RAFDNFQFVN FTDIMSKNID PARKEAEFAL SALMEIPSQY KATLELGLLG QRTGHCPDRI ALPPPTYATQ SMRNSPRTSR STSFQNKPYD NGVSSTPPST
401: THNESQQQFC PVCLVSAKNM AFNCGHQTCA GCGEDLHVCP ICRSSISVRI KLY
101: TAALSHAGLE SSNLIVGIDV TKSNEWTGAR SFGRKSLHFI GTTPNPYQQA ISIIGKTLSV FDEDNLIPCY GFGDATTHDQ DVFSFNPNDT YCNGFEEVLM
201: CYREIVPQLR LSGPTSFAPI IERAMTIVEE SGGQYHVLLI IADGQVTRSV DTDNGGFSPQ EQQTIDAIVR ASEYPLSIVL VGVGDGPWDT MRQFDDNIPA
301: RAFDNFQFVN FTDIMSKNID PARKEAEFAL SALMEIPSQY KATLELGLLG QRTGHCPDRI ALPPPTYATQ SMRNSPRTSR STSFQNKPYD NGVSSTPPST
401: THNESQQQFC PVCLVSAKNM AFNCGHQTCA GCGEDLHVCP ICRSSISVRI KLY
Arabidopsis Description
Copine (Calcium-dependent phospholipid-binding protein) family [Source:UniProtKB/TrEMBL;Acc:F4HTR6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.