Factsheet for HORVU5Hr1G039100.3

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G111900.1	Wheat	cytosol	43.04	96.27
TraesCS5D01G122000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	95.18	95.53
TraesCS5A01G103800.2	Wheat	endoplasmic reticulum, extracellular, golgi	93.88	90.52
Os12t0288400-01	Rice	endoplasmic reticulum, extracellular, vacuole	80.33	79.3
Zm00001d041073_P001	Maize	endoplasmic reticulum, golgi, vacuole	76.25	75.97
OQU79014	Sorghum	plastid	67.9	69.19
CDY27584	Canola	cytosol	27.46	63.79
VIT_17s0000g09640.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	50.65	63.05
KRH54288	Soybean	cytosol, mitochondrion, nucleus, plastid	49.54	62.38
Bra023465.1-P	Field mustard	cytosol, plastid	52.13	62.31
CDX85597	Canola	cytosol, plastid	52.13	62.31
KRH63659	Soybean	cytosol, mitochondrion, nucleus, plastid	49.35	62.3
VIT_01s0137g00460.t01	Wine grape	nucleus	51.02	62.22
Bra032793.1-P	Field mustard	nucleus	43.78	61.78
CDX91062	Canola	cytosol, plastid	51.58	61.5
KRG94356	Soybean	nucleus	48.61	61.22
CDX84957	Canola	cytosol	43.6	61.04
VIT_14s0066g00290.t01	Wine grape	mitochondrion	51.21	59.87
KRH43098	Soybean	endoplasmic reticulum, golgi	51.02	59.78
GSMUA_Achr6P06710_001	Banana	nucleus	50.83	59.57
Bra008758.1-P	Field mustard	nucleus	51.39	59.44
CDX69581	Canola	nucleus, plastid	51.39	59.44
AT5G14420.2	Thale cress	nucleus, plastid	51.58	59.4
CDY09854	Canola	nucleus, plastid	51.21	59.23
Solyc03g111870.2.1	Tomato	nucleus	47.87	59.04
CDX70564	Canola	cytosol, plastid	51.58	59.02
KRH59243	Soybean	endoplasmic reticulum, golgi	50.28	58.91
CDX91935	Canola	cytosol	49.91	58.86
CDX78576	Canola	cytosol, plastid	51.39	58.81
Bra006253.1-P	Field mustard	nucleus, plastid	51.39	58.81
CDX74310	Canola	cytosol	49.91	58.73
Bra000997.1-P	Field mustard	nucleus	49.91	58.73
Bra039105.1-P	Field mustard	nucleus	49.35	58.33
CDY56212	Canola	plastid	47.5	58.05
Bra004260.1-P	Field mustard	plastid	47.5	58.05
KRG97516	Soybean	golgi, plasma membrane	49.35	57.95
CDY49066	Canola	cytosol	49.35	57.83
CDY37509	Canola	cytosol	49.35	57.83
CDY01855	Canola	cytosol, plastid	47.31	57.82
AT1G67800.2	Thale cress	plasma membrane	48.24	57.4
KRH31355	Soybean	golgi, plasma membrane	48.98	57.02
HORVU7Hr1G048620.13	Barley	cytosol	42.12	56.89
AT3G01650.2	Thale cress	cytosol	50.83	56.03
KRH58251	Soybean	nucleus	50.83	55.8
KRG93947	Soybean	nucleus	51.21	55.65
Solyc02g093520.2.1	Tomato	nucleus	50.28	55.08
PGSC0003DMT400032842	Potato	mitochondrion	48.42	53.7
HORVU3Hr1G092250.6	Barley	plastid	49.72	48.29
KRG95016	Soybean	nucleus, peroxisome, plasma membrane	30.98	46.13
HORVU5Hr1G091920.4	Barley	endoplasmic reticulum	30.06	45.76
CDY27585	Canola	cytosol	10.95	45.38
HORVU3Hr1G110870.14	Barley	mitochondrion	38.4	43.4
AT1G24545.1	Thale cress	cytosol	14.47	42.86
HORVU3Hr1G110850.8	Barley	cytosol	26.35	40.8
PGSC0003DMT400039186	Potato	cytosol	47.5	26.67
HORVU6Hr1G010680.1	Barley	cytosol	16.88	15.32
HORVU1Hr1G058000.10	Barley	cytosol	17.25	14.07
HORVU6Hr1G041140.14	Barley	mitochondrion	16.7	13.98

Protein Annotations

MapMan:19.2.2.1.5.3.2	MapMan:19.2.2.1.6.2	Gene3D:3.30.40.10	UniProt:A0A287QW63	InterPro:Copine	EnsemblPlantsGene:HORVU5Hr1G039100
EnsemblPlants:HORVU5Hr1G039100.3	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083	InterPro:IPR036465	PFAM:PF07002
PFAM:PF13920	PFscan:PS50089	PANTHER:PTHR10857	PANTHER:PTHR10857:SF68	SMART:SM00327	SUPFAM:SSF53300
SUPFAM:SSF57850	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000B46829E	InterPro:VWF_A	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	SEG:seg	InterPro:vWFA_dom_sf	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:283359544..283405143

Molecular Weight (calculated)

58379.2 Da

IEP (calculated)

5.098

GRAVY (calculated)

-0.183

Length

539 amino acids

Sequence
(BLAST)

001: MSGFLAVAGK IVTFLLWVLF LVLQTATKVV GGLLQVAPPA EPQDEPQPEA APGPRSPPDA RNRAGGGPAD PYEPRSQLWD LPPPTHTAPV TDEYHSSSIY
101: RRRVSAPQAV EDLVVSSSGY SRFAVTAAPA PPAHAVSAPP VSRTIKTPAV ASKRPKLERK YSKIVDQYRS LDEVIEALAQ AGLESSNLII GIDFTKSNEW
201: TGKSSFNGMS LHHIGDAPNP YEQAISIIGQ TLSAFDEDNL IPCYGFGDAS THDQDVFAFN PDERPCYGFQ EALARYREIV PHLRLSGPTS FSPIIEMATT
301: IVEQSGGQYH VLVIIADGQV TRSVNTEFGQ LSTQEQMTVD AIVQASEFPL SIILVGVGDG PWDMMNEFDD NIPVPARSFD NFQFVNFTGI MSKKISQSNK
401: ETEFALSALM EIPLQYKATL QLGILGCRLA KSPERVPLPP PFASYNSTSR AAPYRANNFR SVPSNLREEA TLDSTITLSV TPPPAADAGA SELQLCPVCL
501: AKPRDMAFGC GHQTCSGCGP QVADCPICRR PIDTRVKLY

Best Arabidopsis Sequence Match ( AT5G14420.1 )
(BLAST)

001: MGTGNSKENW RQSSFRSTSA SSASPSSSSW ASQQSYPQYG AESYNYPPPP SYAQPPEYTQ PPPPLYSTQP YSAPSYSAPP SQSYGSDNKK RLERKYSKIS
101: DDYSSLEQVT EALARAGLES SNLIVGIDFT KSNEWTGARS FNRKSLHFIG SSPNPYEQAI TIIGRTLAAF DEDNLIPCYG FGDASTHDQD VFSFNSEDRF
201: CNGFEEVLSR YKEIVPQLKL AGPTSFAPII DMAMTIVEQS GGQYHVLVII ADGQVTRSVD TENGQLSPQE QKTVDAIVQA SKLPLSIVLV GVGDGPWDMM
301: REFDDNIPAR AFDNFQFVNF TEIMAKNKAQ SLKETEFALS ALMEIPQQYK ATIELNLLGR RNGYIPERFP LPPPMRGGSS SYNSPKPSRL PSFKPSVPPH
401: PTEGYHVRSS PVPPPTSSAS DNQLCPICLS NPKDMAFGCG HQTCCECGPD LQMCPICRAP IQTRIKLY

Arabidopsis Description

RGLG2E3 ubiquitin-protein ligase RGLG2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY87]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.