Factsheet for HORVU3Hr1G110870.14

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G503400.1	Wheat	cytosol	72.54	90.58
TraesCS3B01G566800.1	Wheat	cytosol	71.7	90.24
TraesCS3D01G510000.1	Wheat	cytosol	64.36	89.24
KXG34172	Sorghum	nucleus	64.99	80.1
Zm00001d011821_P007	Maize	cytosol	63.31	70.4
GSMUA_Achr10P...	Banana	nucleus	53.88	67.28
Zm00001d006136_P001	Maize	cytosol	13.0	63.92
VIT_04s0044g01620.t01	Wine grape	cytosol	48.22	62.67
CDX84471	Canola	cytosol, mitochondrion	46.75	61.43
Bra024254.1-P	Field mustard	mitochondrion	46.75	60.93
CDY43775	Canola	cytosol, mitochondrion	46.75	60.76
AT5G63970.1	Thale cress	cytosol	46.12	59.95
CDY31343	Canola	cytosol	46.12	59.95
CDY39835	Canola	cytosol	45.7	59.4
Bra031942.1-P	Field mustard	cytosol, mitochondrion, nucleus	42.14	58.77
Solyc09g065870.2.1	Tomato	nucleus	48.64	55.24
HORVU3Hr1G110850.8	Barley	cytosol	39.2	53.74
KRH59596	Soybean	nucleus	47.38	53.05
KRH64018	Soybean	nucleus	47.8	52.78
GSMUA_Achr5P25940_001	Banana	cytosol	23.9	52.53
HORVU7Hr1G048620.13	Barley	cytosol	41.72	49.87
KRH40948	Soybean	nucleus	32.91	43.98
HORVU5Hr1G091920.4	Barley	endoplasmic reticulum	31.24	42.09
HORVU5Hr1G039100.3	Barley	endoplasmic reticulum, extracellular, golgi	43.4	38.4
KRH53919	Soybean	nucleus	30.19	38.4
HORVU3Hr1G092250.6	Barley	plastid	43.4	37.3
HORVU6Hr1G010680.1	Barley	cytosol	16.77	13.47
HORVU6Hr1G041140.14	Barley	mitochondrion	17.61	13.04
HORVU1Hr1G058000.10	Barley	cytosol	17.19	12.41

Protein Annotations

EnsemblPlants:HORVU3Hr1G110870.14	EnsemblPlantsGene:HORVU3Hr1G110870	InterPro:Copine	InterPro:IPR002035	InterPro:IPR036465	InterPro:VWF_A
InterPro:vWFA_dom_sf	PANTHER:PTHR10857	PANTHER:PTHR10857:SF104	PFAM:PF07002	SEG:seg	SMART:SM00327
SUPFAM:SSF53300	UniParc:UPI000B45FBA2	UniProt:A0A287MPG9	MapMan:19.2.2.1.5.3.2	MapMan:19.2.2.1.6.2	:

Description

No Description!

Coordinates

chrchr3H:-:682177555..682181574

Molecular Weight (calculated)

51954.2 Da

IEP (calculated)

7.028

GRAVY (calculated)

-0.382

Length

477 amino acids

Sequence
(BLAST)

001: RFGLPDASQR RSLDSSSTEP LPNPSAGGVH ACLAARRIRQ PAHRKSAAGK TDALPVAGGG GEARAVPAGR RRQAMWGERA RHRHGHHHDH APSGGSRDRQ
101: PKFIADNYSS VDEVIAALRE AGLESSNLIL GIDFTKSNEW SGRHSFGRKS LHAISGTPNP YEQAISIIGR TLSPFDDDNL IPCFGFGDAS THDHSVFSFY
201: QENRPCRGFE EVLDRYRQIV PHLNLSGPTS FAPLIYAAMS VVESSNCQYH VLVIIADGQV TTSNSGGRLS PQEQATIQAI VDASFYPLSI VMVGVGDGPW
301: DAMQHFDDCI PDRAFDNFQF VNFTGIMSAS KDMSKKEAAF ALAALMEIPT QYKATQGLRP PERHAQNPNP LRILPPPNKV LEHDNIVAAS RAPAATSRST
401: DVGKTASDEQ VCPICLTNPK DMAFQCGHLD MQGMRADAID MPLVPCADYC PCKALFVKMT QPSGSEESVI HAVWYRQ

Best Arabidopsis Sequence Match ( AT1G67800.4 )
(BLAST)

001: MGGSSSKESP RGGGSGRRYE RSVSGSSSYS SAWDQSSYYQ TPNHPSASPV SSYNSGRQTP KNLERKYSRI ADNYRSIDEV TAALSHAGLE SSNLIVGIDV
101: TKSNEWTGAR SFGRKSLHFI GTTPNPYQQA ISIIGKTLSV FDEDNLIPCY GFGDATTHDQ DVFSFNPNDT YCNGFEEVLM CYREIVPQLR LSGPTSFAPI
201: IERAMTIVEE SGGQYHVLLI IADGQVTRSV DTDNGGFSPQ EQQTIDAIVR ASEYPLSIVL VGVGDGPWDT MRQFDDNIPA RAFDNFQFVN FTDIMSKNID
301: PARKEAEFAL SALMEIPSQY KATLELGLLG QRTGHCPDRI ALPPPTYATQ SMRNSPRTSR STSFQNKPYD NGVSSTPPST THNESQQQFC PVCLVSAKNM
401: AFNCGHQTCA GCGEDLHVCP ICRSSISVRI KLY

Arabidopsis Description

Copine (Calcium-dependent phospholipid-binding protein) family [Source:UniProtKB/TrEMBL;Acc:F4HTR6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.