Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G503400.1 | Wheat | cytosol | 85.01 | 86.13 |
| TraesCS3B01G566800.1 | Wheat | cytosol | 84.24 | 86.02 |
| TraesCS3D01G510000.1 | Wheat | cytosol | 75.45 | 84.88 |
| Zm00001d011821_P007 | Maize | cytosol | 93.02 | 83.92 |
| GSMUA_Achr10P... | Banana | nucleus | 70.54 | 71.47 |
| Zm00001d006136_P001 | Maize | cytosol | 17.57 | 70.1 |
| VIT_04s0044g01620.t01 | Wine grape | cytosol | 63.05 | 66.48 |
| CDX84471 | Canola | cytosol, mitochondrion | 61.76 | 65.84 |
| Bra024254.1-P | Field mustard | mitochondrion | 62.02 | 65.57 |
| CDY43775 | Canola | cytosol, mitochondrion | 61.76 | 65.12 |
| HORVU3Hr1G110870.14 | Barley | mitochondrion | 80.1 | 64.99 |
| AT5G63970.1 | Thale cress | cytosol | 60.72 | 64.03 |
| CDY31343 | Canola | cytosol | 60.47 | 63.76 |
| CDY39835 | Canola | cytosol | 60.47 | 63.76 |
| Bra031942.1-P | Field mustard | cytosol, mitochondrion, nucleus | 55.56 | 62.87 |
| Solyc09g065870.2.1 | Tomato | nucleus | 63.57 | 58.57 |
| KRH59596 | Soybean | nucleus | 63.82 | 57.98 |
| KRH64018 | Soybean | nucleus | 63.31 | 56.71 |
| EES13310 | Sorghum | mitochondrion | 56.07 | 53.19 |
| GSMUA_Achr5P25940_001 | Banana | cytosol | 29.2 | 52.07 |
| KXG25698 | Sorghum | cytosol | 52.45 | 50.5 |
| KRH40948 | Soybean | nucleus | 45.48 | 49.3 |
| KXG20338 | Sorghum | nucleus | 56.59 | 48.99 |
| EER98488 | Sorghum | endoplasmic reticulum, golgi | 39.28 | 48.56 |
| EES04073 | Sorghum | nucleus | 56.59 | 47.71 |
| KRH53919 | Soybean | nucleus | 41.34 | 42.67 |
| OQU79015 | Sorghum | mitochondrion | 8.01 | 37.35 |
| OQU79014 | Sorghum | plastid | 48.06 | 35.16 |
| KXG21864 | Sorghum | cytosol | 21.71 | 14.36 |
| KXG30293 | Sorghum | cytosol | 19.12 | 12.8 |
Protein Annotations
| MapMan:19.2.2.1.5.3.2 | MapMan:19.2.2.1.6.2 | Gene3D:3.30.40.10 | UniProt:A0A1B6Q8C7 | InterPro:Copine | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009611 | GO:GO:0009719 | GO:GO:0009867 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0042742 | InterPro:IPR001841 |
| InterPro:IPR002035 | InterPro:IPR013083 | InterPro:IPR036465 | EnsemblPlants:KXG34172 | ProteinID:KXG34172 | ProteinID:KXG34172.1 |
| PFAM:PF07002 | PFAM:PF13920 | PFscan:PS50089 | PANTHER:PTHR10857 | PANTHER:PTHR10857:SF104 | SMART:SM00184 |
| SMART:SM00327 | EnsemblPlantsGene:SORBI_3003G434900 | SUPFAM:SSF53300 | SUPFAM:SSF57850 | UniParc:UPI0001C80BA2 | InterPro:VWF_A |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | InterPro:vWFA_dom_sf | : | : |
Description
hypothetical protein
Coordinates
chr3:-:73628526..73631466
Molecular Weight (calculated)
42814.5 Da
IEP (calculated)
7.003
GRAVY (calculated)
-0.428
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MWGERTHHKH WHQGHGSSGH SKDKNHDKRQ PKFIPDNYSS VDAVTTALRE AGLESSNLIL GIDFTKSNEW SGRHSFRRKS LHAINGTPNP YEQAISIIGR
101: TLSPFDDDNL IPCFGFGDAS THDHSVFSFY PENRLCRGFE EVLARYRQIV PHLNLSGPTS FAPLIYAAIS VVENSNWQYH VLVIIADGQV TASNTNDGRL
201: SPQEQATIQA IVDASHYPLS IVMVGVGDGP WDAMQHFDDC IPERAFDNFQ FVNFTDIMST SKDMSKKEAA FALAALMEIP SQYKATQGLR PPEKHAQRIG
301: SPRILPPPNK VLENDNAAAS HPPQTASSKS TGIGKSTADE QVCPICLTNP KDMAFQCGHL TCKECGPTLS TCPLCRVPIT MRVRLYS
101: TLSPFDDDNL IPCFGFGDAS THDHSVFSFY PENRLCRGFE EVLARYRQIV PHLNLSGPTS FAPLIYAAIS VVENSNWQYH VLVIIADGQV TASNTNDGRL
201: SPQEQATIQA IVDASHYPLS IVMVGVGDGP WDAMQHFDDC IPERAFDNFQ FVNFTDIMST SKDMSKKEAA FALAALMEIP SQYKATQGLR PPEKHAQRIG
301: SPRILPPPNK VLENDNAAAS HPPQTASSKS TGIGKSTADE QVCPICLTNP KDMAFQCGHL TCKECGPTLS TCPLCRVPIT MRVRLYS
001: MNMSNKRNQQ PSYIADHFSS LDQVITSLRE AGLESSNLIL GIDFTKSNEW TGRYSFNRKS LHAIGKRQNP YEKAISIIGR TLSPFDEDDL IPCFGFGDVT
101: TRDQYVFSFY PENKSCDGLE NAVKRYREIV PHLKLSGPTS FAPVIDAAIN IVEQNNMQYH VLVIIADGQV TRNPDVPLGR LSPQEEATMN SIMAASHYPL
201: SIVLVGVGDG PWDTMKQFDD NIPHREFDNF QFVNFTKIMS EHKDAAKKEA AFALAALMEI PFQYKATLSL NRKPVRSSHQ HHKPLPPPPE VIERDNAVRS
301: VPNQMTETAE KSDRLAPSTV PVCPICLTNP KDMAFSCGHT TCKECGVVIT TCPLCRQPIT TRIRLYT
101: TRDQYVFSFY PENKSCDGLE NAVKRYREIV PHLKLSGPTS FAPVIDAAIN IVEQNNMQYH VLVIIADGQV TRNPDVPLGR LSPQEEATMN SIMAASHYPL
201: SIVLVGVGDG PWDTMKQFDD NIPHREFDNF QFVNFTKIMS EHKDAAKKEA AFALAALMEI PFQYKATLSL NRKPVRSSHQ HHKPLPPPPE VIERDNAVRS
301: VPNQMTETAE KSDRLAPSTV PVCPICLTNP KDMAFSCGHT TCKECGVVIT TCPLCRQPIT TRIRLYT
Arabidopsis Description
RGLG3E3 ubiquitin-protein ligase RGLG3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX26]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.