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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d016615_P002 Maize plasma membrane 90.48 96.14
Os02t0521300-01 Rice plasma membrane 86.33 85.45
TraesCS6D01G176800.1 Wheat cytosol, nucleus, plastid 83.39 83.97
TraesCS6A01G189800.1 Wheat cytosol 83.05 83.62
TraesCS6B01G235200.1 Wheat plastid 82.7 82.84
HORVU6Hr1G041140.14 Barley mitochondrion 82.53 74.07
GSMUA_AchrUn_... Banana cytosol, golgi, plastid 50.0 65.98
VIT_17s0000g00210.t01 Wine grape cytosol 64.19 64.41
KRH41052 Soybean endoplasmic reticulum 62.11 61.9
Solyc03g118200.2.1 Tomato cytosol 60.73 60.52
KRH54085 Soybean cytosol 60.21 60.21
KRH20017 Soybean cytosol 28.03 59.34
AT5G61900.3 Thale cress cytosol 58.13 58.13
CDX98983 Canola cytosol, plastid 24.57 57.96
Solyc06g068840.2.1 Tomato cytosol 57.09 57.19
CDX78287 Canola cytosol 57.79 56.9
Bra005931.1-P Field mustard cytosol 57.79 56.9
CDY00235 Canola cytosol 56.92 56.72
Bra010041.1-P Field mustard cytosol 56.92 56.72
CDX81044 Canola cytosol 57.27 56.39
CDX86951 Canola cytosol 56.57 56.38
AT5G07300.1 Thale cress cytosol 57.09 56.31
Bra029301.1-P Field mustard cytosol, plastid 56.06 55.77
KRH63871 Soybean cytosol 59.86 55.63
CDX98984 Canola cytosol 56.23 55.37
CDX70026 Canola cytosol 56.4 55.35
Bra009273.1-P Field mustard cytosol 56.23 55.18
KXG21864 Sorghum cytosol 53.29 52.65
AT5G61910.4 Thale cress cytosol 58.13 24.96
EER98488 Sorghum endoplasmic reticulum, golgi 12.8 23.64
KXG25698 Sorghum cytosol 14.19 20.4
KXG20338 Sorghum nucleus 15.05 19.46
EES04073 Sorghum nucleus 15.22 19.17
KXG34172 Sorghum nucleus 12.8 19.12
EES13310 Sorghum mitochondrion 12.8 18.14
OQU79014 Sorghum plastid 14.71 16.07
OQU79015 Sorghum mitochondrion 0.52 3.61
Protein Annotations
Gene3D:2.60.40.150MapMan:27.2.7Gene3D:3.40.50.410UniProt:A0A194YPY2InterPro:BONZAIInterPro:C2B_Copine
InterPro:C2_domInterPro:C2_domain_sfInterPro:CopineGO:GO:0003674GO:GO:0005488GO:GO:0005544
GO:GO:0008150GO:GO:0008219GO:GO:0008289GO:GO:0009987GO:GO:0060548InterPro:IPR000008
InterPro:IPR002035InterPro:IPR035892InterPro:IPR036465EnsemblPlants:KXG30293ProteinID:KXG30293ProteinID:KXG30293.1
PFAM:PF00168PFAM:PF07002PFscan:PS50004PANTHER:PTHR10857PANTHER:PTHR10857:SF108SMART:SM00239
SMART:SM00327EnsemblPlantsGene:SORBI_3004G158700SUPFAM:SSF49562SUPFAM:SSF53300UniParc:UPI0007F2DE06InterPro:VWF_A
SEG:segInterPro:vWFA_dom_sf::::
Description
hypothetical protein
Coordinates
chr4:+:50495773..50508718
Molecular Weight (calculated)
63741.1 Da
IEP (calculated)
5.489
GRAVY (calculated)
-0.162
Length
578 amino acids
Sequence
(BLAST)
001: MGNCCSDEVS HAGAHHVGAA AAAKAASAAS AAADRFLRSR GAGASTQIEL SLSASNLGDQ EYFPKSNPMV VVYSKRRDGA LEEIGRSEVI LNSLNPFWTT
101: KISAQYQFEV LQPLVFQVFD IHQQFHDVSE KMLKLEEQEF LGEATCLLSE VITKRDRLLT LKLGVSEHNL PNPNKFGELT VQAEESSGSK AIMEMIFRCS
201: DLEIKDLLTK SDTFLLISGI SDSGMPVPIC KTEVRKNDLN PRWRPVILNL QQIGSKENPL IIECFNFSSN GKHDLVGKIV KSVAELENMY HRKNGENFFV
301: PASNAHECHS KEVLKSQLYV EKYVESNRHT FLDYISVGCQ LNFMVGVDFT ASNGNPRLPD SLHYIDPSGR PNVYQKAILE VGDVLQYYDP AKRFPAWGFG
401: ARPIDGPCSH CFNLNGSTYQ PEVDGIQGIM SAYISALRNV SLAGPTLFGQ LISTAMAIAS QSLADNQQKY FILLIVTDGV VTDFQETIDA IIKASDFPIS
501: IIVVGVGGAD FKEMEFLDPN KGEKLESSTG RVASRDMIQF APMKDMHGSG ISTLQSLLAE IPGQFMTYMR TRETQTIS
Best Arabidopsis Sequence Match ( AT5G61900.1 )
(BLAST)
001: MGNCCSDVAS GAGATAGVGG SGSSAALGAT NDALDYYLKS KGFNGLFSQI ELSFSASNLR DRDVLSKSDP MVVVYQKEKD ATLSEVFRSE VVLNSLAPKW
101: IKKFIVAYHF ETVQTLVFRV YDVDTKFQNS REEMLKLDEQ QFLGEATCAL SEIITKSTRT STLELKRKDG FAPQAQPHHG KLIIHAEESL ASKISTEIVF
201: RCSNLESKDL FSKSDPFLVV SKIVEHGTPI PVSKTEVRKN DLNPIWKPVF LSVQQVGSKD SPVIIECSDF NSNGKHSLIG KVQKSLSDLE KLHLAGQGIN
301: FSLPTGAGQN KVLKSQLFVD KFTETVHHTF LEYLASGFEL NFMVAIDFTA SNGNPRLPDS LHYIDPSGRL NAYQRAIMDV GEVLQFYDSD KRFPAWGFGA
401: RPIDAPVSHC FNLNGSSSYS EVDGIQGIMT SYTSALFNVS LAGPTLFGPV INAAAMIASA SLAQGSRKYY VLLIITDGVI TDLQETKDAL VSASDLPLSI
501: LIVGVGGADF KEMEILDADK GERLESSSGR LASRDIVQFV ALRDVQYGEI SVVQALLAEL PSQFLTYMRI RNMKPIPP
Arabidopsis Description
BON1Protein BONZAI 1 [Source:UniProtKB/Swiss-Prot;Acc:Q941L3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.