Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005931.1-P | Field mustard | cytosol | 97.96 | 97.96 |
| CDX78287 | Canola | cytosol | 97.96 | 97.96 |
| CDX70026 | Canola | cytosol | 91.99 | 91.68 |
| CDX98984 | Canola | cytosol | 90.8 | 90.8 |
| AT5G07300.1 | Thale cress | cytosol | 90.12 | 90.27 |
| CDX98983 | Canola | cytosol, plastid | 36.97 | 88.57 |
| CDY00235 | Canola | cytosol | 79.22 | 80.17 |
| CDX86951 | Canola | cytosol | 78.53 | 79.48 |
| VIT_17s0000g00210.t01 | Wine grape | cytosol | 71.55 | 72.92 |
| KRH41052 | Soybean | endoplasmic reticulum | 67.8 | 68.62 |
| Solyc03g118200.2.1 | Tomato | cytosol | 67.12 | 67.93 |
| KRH54085 | Soybean | cytosol | 65.93 | 66.95 |
| KRH20017 | Soybean | cytosol | 30.83 | 66.3 |
| Solyc06g068840.2.1 | Tomato | cytosol | 64.74 | 65.86 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, plastid | 49.06 | 65.75 |
| KRH63871 | Soybean | cytosol | 64.91 | 61.25 |
| CDY22660 | Canola | cytosol | 58.09 | 58.69 |
| Os02t0521300-01 | Rice | plasma membrane | 58.09 | 58.39 |
| CDY06335 | Canola | cytosol | 57.41 | 57.8 |
| Zm00001d016615_P002 | Maize | plasma membrane | 53.15 | 57.35 |
| KXG30293 | Sorghum | cytosol | 56.39 | 57.27 |
| TraesCS6B01G235200.1 | Wheat | plastid | 56.22 | 57.19 |
| TraesCS6D01G176800.1 | Wheat | cytosol, nucleus, plastid | 55.88 | 57.14 |
| TraesCS6A01G189800.1 | Wheat | cytosol | 55.54 | 56.79 |
| HORVU6Hr1G041140.14 | Barley | mitochondrion | 56.22 | 51.24 |
| CDY27584 | Canola | cytosol | 10.9 | 27.59 |
| CDY50776 | Canola | cytosol | 3.07 | 24.32 |
| CDX84957 | Canola | cytosol | 14.48 | 22.08 |
| CDX99619 | Canola | cytosol | 2.56 | 22.06 |
| CDY56212 | Canola | plastid | 16.35 | 21.77 |
| CDY01855 | Canola | cytosol, plastid | 16.18 | 21.54 |
| CDX84471 | Canola | cytosol, mitochondrion | 13.29 | 21.49 |
| CDY31343 | Canola | cytosol | 13.29 | 21.25 |
| CDY39835 | Canola | cytosol | 13.29 | 21.25 |
| CDY43775 | Canola | cytosol, mitochondrion | 13.29 | 21.25 |
| CDY49066 | Canola | cytosol | 16.35 | 20.87 |
| CDY37509 | Canola | cytosol | 16.35 | 20.87 |
| CDX91935 | Canola | cytosol | 16.01 | 20.57 |
| CDX85597 | Canola | cytosol, plastid | 15.67 | 20.4 |
| CDX70564 | Canola | cytosol, plastid | 16.35 | 20.38 |
| CDX79314 | Canola | cytosol, plastid | 13.12 | 20.32 |
| CDX74310 | Canola | cytosol | 15.84 | 20.31 |
| CDY09854 | Canola | nucleus, plastid | 16.01 | 20.17 |
| CDX69581 | Canola | nucleus, plastid | 16.01 | 20.17 |
| CDX78576 | Canola | cytosol, plastid | 16.18 | 20.17 |
| CDX91062 | Canola | cytosol, plastid | 15.5 | 20.13 |
| CDX67997 | Canola | cytosol | 12.95 | 20.11 |
| CDX85680 | Canola | mitochondrion, plastid | 4.94 | 19.73 |
| CDX87387 | Canola | plastid | 13.46 | 19.65 |
| CDX88533 | Canola | plastid | 13.46 | 19.6 |
| CDY52873 | Canola | plastid | 9.71 | 18.63 |
| CDX72278 | Canola | plastid | 10.22 | 16.17 |
| CDY03984 | Canola | cytosol | 3.92 | 7.74 |
| CDY49067 | Canola | extracellular | 1.87 | 7.33 |
| CDY27585 | Canola | cytosol | 1.53 | 6.92 |
| CDY25816 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:27.2.7 | GO:A0A078CYK0 | InterPro:BONZAI | InterPro:C2B_Copine | InterPro:C2_dom |
| InterPro:C2_domain_sf | EnsemblPlants:CDX81044 | ProteinID:CDX81044 | ProteinID:CDX81044.1 | InterPro:Copine | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005544 | GO:GO:0008150 | GO:GO:0008219 | GO:GO:0008289 | GO:GO:0009987 |
| GO:GO:0060548 | EnsemblPlantsGene:GSBRNA2T00134480001 | InterPro:IPR000008 | InterPro:IPR002035 | InterPro:IPR035892 | InterPro:IPR036465 |
| PFAM:PF00168 | PFAM:PF07002 | PFscan:PS50004 | PFscan:PS50234 | PANTHER:PTHR10857 | PANTHER:PTHR10857:SF108 |
| SMART:SM00239 | SMART:SM00327 | SUPFAM:SSF49562 | SUPFAM:SSF53300 | UniParc:UPI0004EF3487 | InterPro:VWF_A |
| SEG:seg | InterPro:vWFA_dom_sf | : | : | : | : |
Description
BnaC03g02980D
Coordinates
chrLK031823:+:1439981..1443925
Molecular Weight (calculated)
64308.3 Da
IEP (calculated)
5.173
GRAVY (calculated)
-0.145
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSCWSDGSG RGGGMVGVGG NTSSSAAAGG YASPNDAVDY YLKSRGFNGL FSQIELSFSA SNLRDRDVTS KSDAMVVVFT KGRDGTLSES FRSEVVLNSL
101: NPKWIKKFNI RYQFEVVQTL LFRIYDIDTQ FQNSKEEMLK LDEQQFLGEA TCTLSEVITK SNRTVALELT RKEGTQPQNH GKLIVHAEES LASKTTTEIV
201: FRCLNLESMD HFSKSDPFLV ISKIVEHGAP IPVSKTEVLK NESNPVWKPV SLSVQQVGSK DTPLVIECLD FNGNGNHNLI GKVQKSLADL EKLHLSGQGI
301: NLFLPTGVGH KHEDRALKSQ LFVDKFTETV QHTFLEYLAS GFELNFMVAI DFTASNGNPR LPDSLHYIDP TGRLNAYQRA IVEVGEVLQF YDTDKRFPAW
401: GFGARPIDIP VSHCFNLNGS STYCEVDGIQ GIMNAYNGAL FNVSFAGPTL FGPVIKAAAT IASESLAQNA KRYYVLLIIT DGVITDLQET KDALVSASDL
501: PLSILIVGVG GADYKEMEVL DGDKGERLES SSGRVASRDI VQFVALRDMQ YGEVSVVEAL LAELPSQFLT YMRNRNITPT SITTSAS
101: NPKWIKKFNI RYQFEVVQTL LFRIYDIDTQ FQNSKEEMLK LDEQQFLGEA TCTLSEVITK SNRTVALELT RKEGTQPQNH GKLIVHAEES LASKTTTEIV
201: FRCLNLESMD HFSKSDPFLV ISKIVEHGAP IPVSKTEVLK NESNPVWKPV SLSVQQVGSK DTPLVIECLD FNGNGNHNLI GKVQKSLADL EKLHLSGQGI
301: NLFLPTGVGH KHEDRALKSQ LFVDKFTETV QHTFLEYLAS GFELNFMVAI DFTASNGNPR LPDSLHYIDP TGRLNAYQRA IVEVGEVLQF YDTDKRFPAW
401: GFGARPIDIP VSHCFNLNGS STYCEVDGIQ GIMNAYNGAL FNVSFAGPTL FGPVIKAAAT IASESLAQNA KRYYVLLIIT DGVITDLQET KDALVSASDL
501: PLSILIVGVG GADYKEMEVL DGDKGERLES SSGRVASRDI VQFVALRDMQ YGEVSVVEAL LAELPSQFLT YMRNRNITPT SITTSAS
001: MGSCWSDGSY AGGGMVGVGG GANSSAATPN DAVDYYLKSR GYNGLFSQIE LSFSASNLRD RDVISKSDAM VVVYTKGRDG TLAELFRSEV VLNSLNPKWI
101: KNFTIGYQFE IVQTLLFRVY DIDTQFQNSK EELLKLDEQQ FLGEATCTLS EVVTKSNRTI ALELMRKEGV AAQTQPQHNG KLIVHAEESL ASKTNTEIVF
201: RGLNLESKDT FSKSDPFLVI SKIVEHGTPI PVSKTEVLKN DPNPLWKPVS LSVQQVGSKD SPLVIECLDF NGNGNHDLIG KVQKSLSDLE KLHLAGQGIN
301: LALPTGVGHK HEDRVLKSQL FVDKFTETVQ HTFLEYLASG FELNFMVAID FTASNGNPRL PDSLHYIDPT GRLNAYQRAI VEVGEVLQFY DSDKRFPAWG
401: FGARPIDIPV SHCFNLNGSS TYCEVDGIQG IMNAYNGALF NVSFAGPTLF GPVINAAATI ASDSLAQSAK KYYVLLIITD GVITDLQETR DSIVSASDLP
501: LSILIVGVGG ADYKEMEVLD GDKGEKLESS SGRIASRDIV QFVALRDIQY GEVSVVEALL AELPTQFLTY MRNRNITPTT TTPSST
101: KNFTIGYQFE IVQTLLFRVY DIDTQFQNSK EELLKLDEQQ FLGEATCTLS EVVTKSNRTI ALELMRKEGV AAQTQPQHNG KLIVHAEESL ASKTNTEIVF
201: RGLNLESKDT FSKSDPFLVI SKIVEHGTPI PVSKTEVLKN DPNPLWKPVS LSVQQVGSKD SPLVIECLDF NGNGNHDLIG KVQKSLSDLE KLHLAGQGIN
301: LALPTGVGHK HEDRVLKSQL FVDKFTETVQ HTFLEYLASG FELNFMVAID FTASNGNPRL PDSLHYIDPT GRLNAYQRAI VEVGEVLQFY DSDKRFPAWG
401: FGARPIDIPV SHCFNLNGSS TYCEVDGIQG IMNAYNGALF NVSFAGPTLF GPVINAAATI ASDSLAQSAK KYYVLLIITD GVITDLQETR DSIVSASDLP
501: LSILIVGVGG ADYKEMEVLD GDKGEKLESS SGRIASRDIV QFVALRDIQY GEVSVVEALL AELPTQFLTY MRNRNITPTT TTPSST
Arabidopsis Description
BON2Protein BONZAI 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5S1W2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.