CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010041.1-P	Field mustard	cytosol	100.0	100.0
CDX86951	Canola	cytosol	98.45	98.45
Bra029301.1-P	Field mustard	cytosol, plastid	91.9	91.74
AT5G61900.3	Thale cress	cytosol	90.0	90.31
CDX78287	Canola	cytosol	80.34	79.39
CDX70026	Canola	cytosol	80.52	79.29
CDX81044	Canola	cytosol	80.17	79.22
CDX98984	Canola	cytosol	79.66	78.71
CDX98983	Canola	cytosol, plastid	32.59	77.14
VIT_17s0000g00210.t01	Wine grape	cytosol	72.41	72.92
KRH41052	Soybean	endoplasmic reticulum	71.38	71.38
Solyc03g118200.2.1	Tomato	cytosol	71.21	71.21
KRH54085	Soybean	cytosol	69.14	69.38
Solyc06g068840.2.1	Tomato	cytosol	67.93	68.28
KRH20017	Soybean	cytosol	32.07	68.13
GSMUA_AchrUn_...	Banana	cytosol, golgi, plastid	49.66	65.75
KRH63871	Soybean	cytosol	68.79	64.15
CDY22660	Canola	cytosol	59.14	59.04
CDY06335	Canola	cytosol	58.45	58.15
Os02t0521300-01	Rice	plasma membrane	58.1	57.71
KXG30293	Sorghum	cytosol	56.72	56.92
TraesCS6B01G235200.1	Wheat	plastid	56.38	56.67
Zm00001d016615_P002	Maize	plasma membrane	53.1	56.62
TraesCS6D01G176800.1	Wheat	cytosol, nucleus, plastid	55.86	56.45
TraesCS6A01G189800.1	Wheat	cytosol	55.52	56.1
HORVU6Hr1G041140.14	Barley	mitochondrion	55.86	50.31
AT5G61910.4	Thale cress	cytosol	90.0	38.78
CDY27584	Canola	cytosol	11.21	28.02
CDY50776	Canola	cytosol	3.1	24.32
CDX84957	Canola	cytosol	14.66	22.08
CDX99619	Canola	cytosol	2.59	22.06
CDY49066	Canola	cytosol	17.07	21.52
CDX84471	Canola	cytosol, mitochondrion	13.45	21.49
CDY37509	Canola	cytosol	16.9	21.3
CDX85597	Canola	cytosol, plastid	16.55	21.29
CDY43775	Canola	cytosol, mitochondrion	13.45	21.25
CDX91935	Canola	cytosol	16.72	21.23
CDY56212	Canola	plastid	16.03	21.09
CDX91062	Canola	cytosol, plastid	16.38	21.02
CDY31343	Canola	cytosol	13.28	20.98
CDY39835	Canola	cytosol	13.28	20.98
CDX74310	Canola	cytosol	16.55	20.96
CDY01855	Canola	cytosol, plastid	15.86	20.86
CDY09854	Canola	nucleus, plastid	16.72	20.82
CDX69581	Canola	nucleus, plastid	16.72	20.82
CDX70564	Canola	cytosol, plastid	16.72	20.59
CDX78576	Canola	cytosol, plastid	16.55	20.38
CDX79314	Canola	cytosol, plastid	13.28	20.32
CDX67997	Canola	cytosol	12.93	19.84
CDX85680	Canola	mitochondrion, plastid	5.0	19.73
CDX87387	Canola	plastid	13.62	19.65
CDX88533	Canola	plastid	13.62	19.6
CDY52873	Canola	plastid	9.83	18.63
CDX72278	Canola	plastid	10.17	15.9
CDY03984	Canola	cytosol	4.31	8.42
CDY49067	Canola	extracellular	2.07	8.0
CDY27585	Canola	cytosol	1.38	6.15
CDY25816	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.60.40.150	MapMan:27.2.7	GO:A0A078EDS2	InterPro:BONZAI	InterPro:C2B_Copine	InterPro:C2_dom
InterPro:C2_domain_sf	EnsemblPlants:CDY00235	ProteinID:CDY00235	ProteinID:CDY00235.1	InterPro:Copine	GO:GO:0003674
GO:GO:0005488	GO:GO:0005544	GO:GO:0008150	GO:GO:0008219	GO:GO:0008289	GO:GO:0009987
GO:GO:0060548	EnsemblPlantsGene:GSBRNA2T00109784001	InterPro:IPR000008	InterPro:IPR002035	InterPro:IPR035892	InterPro:IPR036465
PFAM:PF00168	PFAM:PF07002	PFscan:PS50004	PFscan:PS50234	PANTHER:PTHR10857	PANTHER:PTHR10857:SF108
SMART:SM00239	SMART:SM00327	SUPFAM:SSF49562	SUPFAM:SSF53300	UniParc:UPI000253EED3	InterPro:VWF_A
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

BnaA06g21360D

Coordinates

chrLK031917:-:319841..323425

Molecular Weight (calculated)

63601.9 Da

IEP (calculated)

6.073

GRAVY (calculated)

-0.067

Length

580 amino acids

Sequence
(BLAST)

001: MGNCCSDVSS GAGAIAGVGG TAAISSARGT TNDAVDYYLK SRGFNGLFSH IELSFSASNL RDRDVLSKSD PMVVVYRKEK DETLSEVYRS EVVLNSLAPK
101: WIKKFTLAYH FETVQTFLFR VYDVDTQYQN SKEEMLKLDQ QQFLGEATCV LSEIITKSTK TITLELKRKE GVTAQTQHHH GKLIIHAEES LASKVTTEIV
201: FRCSSLESKD LFSKSDPFLV VSKIVEQGTP IPVSKTEVLK NNLNPIWKPL FLSVQQVGSK DSPLIIECSD FNSNGKHSLI GKVQKSLSDL EKLHLAGQGI
301: NLSLPTTGAG QSKVLKSQLF VEKFTETVQH TFLEYLASGF ELSFMVAIDF TASNGNPRLP DSLHYIDPSG HLNAYQRAIV DVGEVLQFYD SDKRFPAWGF
401: GARPIDSPVS HCFNLNGSSS YSEVDGIQGI MTSYTSALFN VSLAGPTLFG PVINSAAMIA SQSLAQGSRR YYVLLIITDG VITDLQETKD ALVSASDLPL
501: SILIVGVGGA DFKEMEILDA DRGERLESSS GRVASRDIVQ FVALRDVQHG EVSVVQALLA ELPSQFLTYM RIRNMKPVPL

Best Arabidopsis Sequence Match ( AT5G61910.4 )
(BLAST)

0001: METEMDFSDG EQTNGNSHVT ASQYFAPPGY NRSLVAAYGN GNTTIGLEKG IERRLDHHEQ LPGYIFMCNG RTKTDCYRYR VFGIPRGGKD VVESIKPGMK
0101: LFLYDFEKRL LYGVYEATVG GRLDIEPEAF EGKYPAQVGF RIVMNCLPLT ENTFKSAIYE NYKGSKFKQE LSPHQVMSLL SLFRSFTSPE LDLLPHRLAS
0201: RASAPRTLSF EERFIAATHL RNASSVLDPL SARHVEPRLG SVMAHQPVPR TSLLQHSYFR QDDYTTPPRE SLSNLNQPYY PTEARQLRLL GDPSRSDSPR
0301: SEPPRSSIQD PQLKYLTILS NIRRYGSASD RLASENEYHP ATPSEKDQFA VPYSDNKNYP STLSGSEHPS ASAANGSVYR SEFYNSASQK EGEASQQHEI
0401: PAGTYHHPEA STVSNTTKSM QPDMQAVSVA QSHTETAGYP TPAHGEASQP PAGAIGYTHQ PQSVAGNYST HSQPGNVEES TQSYAGTDSY SQQQYYAAMG
0501: PTTQLHAGGY IQKPHEIGYS QQPHDAATGY SQQPHDAATG YSQQPHDAAT GYSQQPHAAS TGYSQQTYAA ATGYTQQPHA AAAGYTQQPH AAATGYSQQP
0601: HAAATAHAQQ PYAAATAHAQ QLHAVATGYA LQLHAAATGY AQQPHAAATG YALQPHAQAV EYTMQPHAQA VGYMPQYHAH AVEIGMQCIS LITLRQQMQP
0701: QRIIKHLKTL KQSVATLDLR NLCVMGAEAW TRTGALSGKE GQGHKTRVSS SVYCTFESAV FFVGKSKIMG NCCSDVASGA GATAGVGGSG SSAALGATND
0801: ALDYYLKSKG FNGLFSQIEL SFSASNLRDR DVLSKSDPMV VVYQKEKDAT LSEVFRSEVV LNSLAPKWIK KFIVAYHFET VQTLVFRVYD VDTKFQNSRE
0901: EMLKLDEQQF LGEATCALSE IITKSTRTST LELKRKDGFA PQAQPHHGKL IIHAEESLAS KISTEIVFRC SNLESKDLFS KSDPFLVVSK IVEHGTPIPV
1001: SKTEVRKNDL NPIWKPVFLS VQQVGSKDSP VIIECSDFNS NGKHSLIGKV QKSLSDLEKL HLAGQGINFS LPTGAGQNKV LKSQLFVDKF TETVHHTFLE
1101: YLASGFELNF MVAIDFTASN GNPRLPDSLH YIDPSGRLNA YQRAIMDVGE VLQFYDSDKR FPAWGFGARP IDAPVSHCFN LNGSSSYSEV DGIQGIMTSY
1201: TSALFNVSLA GPTLFGPVIN AAAMIASASL AQGSRKYYVL LIITDGVITD LQETKDALVS ASDLPLSILI VGVGGADFKE MEILDADKGE RLESSSGRLA
1301: SRDIVQFVAL RDVQYGEISV VQALLAELPS QFLTYMRIRN MKPIPP

Arabidopsis Description

DCD (Development and Cell Death) domain protein [Source:UniProtKB/TrEMBL;Acc:F4K518]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.