Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06335 | Canola | cytosol | 98.62 | 98.28 |
| Bra031645.1-P | Field mustard | cytosol | 98.28 | 97.94 |
| AT1G08860.1 | Thale cress | cytosol | 87.78 | 87.33 |
| VIT_14s0030g00550.t01 | Wine grape | cytosol | 56.63 | 68.83 |
| VIT_18s0072g00560.t01 | Wine grape | peroxisome | 19.79 | 68.45 |
| VIT_14s0030g00540.t01 | Wine grape | cytosol | 53.36 | 67.69 |
| VIT_14s0030g00600.t01 | Wine grape | cytosol | 60.41 | 67.5 |
| VIT_12s0121g00080.t01 | Wine grape | cytosol | 68.67 | 67.06 |
| Solyc10g045500.1.1 | Tomato | cytosol | 14.63 | 66.41 |
| VIT_14s0030g00500.t01 | Wine grape | cytosol | 67.13 | 65.66 |
| VIT_18s0001g15760.t01 | Wine grape | cytosol, extracellular | 10.84 | 65.62 |
| KRH68626 | Soybean | cytosol | 65.06 | 65.17 |
| KRH68625 | Soybean | cytosol | 66.09 | 64.97 |
| KRG96891 | Soybean | cytosol | 65.23 | 63.8 |
| GSMUA_Achr5P08050_001 | Banana | cytosol | 64.2 | 62.79 |
| KXG21864 | Sorghum | cytosol | 62.82 | 62.39 |
| Zm00001d037872_P001 | Maize | plasma membrane | 62.99 | 62.14 |
| TraesCS1D01G236200.1 | Wheat | cytosol | 62.82 | 61.86 |
| Os05t0373300-01 | Rice | plasma membrane | 63.34 | 61.74 |
| TraesCS1A01G236100.4 | Wheat | cytosol | 62.65 | 61.69 |
| TraesCS1B01G247700.2 | Wheat | cytosol | 62.65 | 61.69 |
| TraesCS6D01G057900.2 | Wheat | cytosol | 61.62 | 60.68 |
| TraesCS6B01G074300.2 | Wheat | cytosol | 61.45 | 60.51 |
| CDX98983 | Canola | cytosol, plastid | 25.47 | 60.41 |
| VIT_14s0030g00570.t01 | Wine grape | cytosol | 69.19 | 60.27 |
| CDX86951 | Canola | cytosol | 59.38 | 59.48 |
| HORVU6Hr1G010680.1 | Barley | cytosol | 60.59 | 59.26 |
| CDY00235 | Canola | cytosol | 59.04 | 59.14 |
| CDX70026 | Canola | cytosol | 59.72 | 58.91 |
| CDX98984 | Canola | cytosol | 59.21 | 58.6 |
| CDX78287 | Canola | cytosol | 59.04 | 58.43 |
| CDX81044 | Canola | cytosol | 58.69 | 58.09 |
| TraesCS6A01G058200.2 | Wheat | cytosol, plastid | 61.79 | 56.71 |
| HORVU1Hr1G058000.10 | Barley | cytosol | 62.13 | 54.61 |
| TraesCS7A01G414000.1 | Wheat | cytosol | 45.78 | 45.24 |
| CDY27584 | Canola | cytosol | 10.33 | 25.86 |
| CDY50776 | Canola | cytosol | 3.27 | 25.68 |
| CDY49066 | Canola | cytosol | 16.52 | 20.87 |
| CDY37509 | Canola | cytosol | 16.52 | 20.87 |
| CDY56212 | Canola | plastid | 15.83 | 20.86 |
| CDX84957 | Canola | cytosol | 13.77 | 20.78 |
| CDY01855 | Canola | cytosol, plastid | 15.66 | 20.63 |
| CDX99619 | Canola | cytosol | 2.41 | 20.59 |
| CDX91935 | Canola | cytosol | 16.18 | 20.57 |
| CDY39835 | Canola | cytosol | 12.74 | 20.16 |
| CDY31343 | Canola | cytosol | 12.74 | 20.16 |
| CDX74310 | Canola | cytosol | 15.83 | 20.09 |
| CDX85597 | Canola | cytosol, plastid | 15.49 | 19.96 |
| CDX84471 | Canola | cytosol, mitochondrion | 12.39 | 19.83 |
| CDY43775 | Canola | cytosol, mitochondrion | 12.39 | 19.62 |
| CDX79314 | Canola | cytosol, plastid | 12.74 | 19.53 |
| CDX91062 | Canola | cytosol, plastid | 15.15 | 19.47 |
| CDX70564 | Canola | cytosol, plastid | 15.66 | 19.32 |
| CDY09854 | Canola | nucleus, plastid | 15.49 | 19.31 |
| CDX87387 | Canola | plastid | 13.25 | 19.15 |
| CDX78576 | Canola | cytosol, plastid | 15.49 | 19.11 |
| CDX88533 | Canola | plastid | 13.25 | 19.11 |
| CDX69581 | Canola | nucleus, plastid | 15.32 | 19.1 |
| CDX67997 | Canola | cytosol | 12.39 | 19.05 |
| CDX85680 | Canola | mitochondrion, plastid | 4.65 | 18.37 |
| CDY52873 | Canola | plastid | 9.29 | 17.65 |
| CDX72278 | Canola | plastid | 9.81 | 15.36 |
| CDY03984 | Canola | cytosol | 3.79 | 7.41 |
| CDY49067 | Canola | extracellular | 1.89 | 7.33 |
| CDY27585 | Canola | cytosol | 1.2 | 5.38 |
| CDY25816 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:27.2.7 | GO:A0A078G866 | UniProt:A0A078G866 | InterPro:BONZAI | InterPro:C2B_Copine |
| InterPro:C2_dom | InterPro:C2_domain_sf | EnsemblPlants:CDY22660 | ProteinID:CDY22660 | ProteinID:CDY22660.1 | InterPro:Copine |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005544 | GO:GO:0008150 | GO:GO:0008219 | GO:GO:0008289 |
| GO:GO:0009987 | GO:GO:0060548 | EnsemblPlantsGene:GSBRNA2T00019330001 | InterPro:IPR000008 | InterPro:IPR002035 | InterPro:IPR035892 |
| InterPro:IPR036465 | PFAM:PF00168 | PFAM:PF07002 | PFscan:PS50004 | PFscan:PS50234 | PANTHER:PTHR10857 |
| PANTHER:PTHR10857:SF108 | SMART:SM00239 | SMART:SM00327 | SUPFAM:SSF49562 | SUPFAM:SSF53300 | UniParc:UPI0004EE7248 |
| InterPro:VWF_A | InterPro:vWFA_dom_sf | : | : | : | : |
Description
BnaC08g42940DBnaC08g42940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G866]
Coordinates
chrLK032134:-:340506..344673
Molecular Weight (calculated)
63900.1 Da
IEP (calculated)
5.662
GRAVY (calculated)
-0.122
Length
581 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCLTGDVA GGKQAIGGVQ QRPTSTNNAG QNDAVDFFFR SRGQYPLFSQ IELSLSASNL IDRDITSKSD PMAVMYLRKK DGNLEEIGRT EVILNSLNPN
101: WIEKITVSFQ FETVQTLVFH VFDVDTRYHN VPVKTLKLKE QDYLGEATCV LSEVMTKPNR SMTLNLHGNF GAGVSRKLGT LSVQAEETIA SKTVVEMNLR
201: SVNLDNKDLF SKSDPFLRIS RLVENSIVVP VCRTEVVDNN LNPIWKPVCL TMQQFGSKDT PLLIECLDFN TSGNHELIGR TEKSVAELER LCQQREAINF
301: VYPSTSHGRN KVLKGQLIVD RFVEKVQYSF LDYISSGFEL NFMVAVDFTA SNGDPRTPSS LHYNDPSGRL NSYQKAIVEV GEVIQFYDSD RRFPAWGFGG
401: RTADGHVSHA FNLNGASYGD EVVGVEGIMS AYSSALANVA LAGPTLFSHV VDKAAHIASQ SLSQNSPKYF VLLIITDGVL TDMAGTIDAL VRASDLPLSV
501: LIVGVGNTDF TQMEILDADK GRRLESSTGR VATRDIVQFV PMKDVHSGQV SVVQALLEEL PGQFLSYVRC RNINPVGAPA I
101: WIEKITVSFQ FETVQTLVFH VFDVDTRYHN VPVKTLKLKE QDYLGEATCV LSEVMTKPNR SMTLNLHGNF GAGVSRKLGT LSVQAEETIA SKTVVEMNLR
201: SVNLDNKDLF SKSDPFLRIS RLVENSIVVP VCRTEVVDNN LNPIWKPVCL TMQQFGSKDT PLLIECLDFN TSGNHELIGR TEKSVAELER LCQQREAINF
301: VYPSTSHGRN KVLKGQLIVD RFVEKVQYSF LDYISSGFEL NFMVAVDFTA SNGDPRTPSS LHYNDPSGRL NSYQKAIVEV GEVIQFYDSD RRFPAWGFGG
401: RTADGHVSHA FNLNGASYGD EVVGVEGIMS AYSSALANVA LAGPTLFSHV VDKAAHIASQ SLSQNSPKYF VLLIITDGVL TDMAGTIDAL VRASDLPLSV
501: LIVGVGNTDF TQMEILDADK GRRLESSTGR VATRDIVQFV PMKDVHSGQV SVVQALLEEL PGQFLSYVRC RNINPVGAPA I
001: MGGCLSGDVK GGKQAIGGVQ QRPTSSTIAN NAAHNDAVDF FFRSRGQYPL FSQIELTLSA SNLLDCDITS KSDPMAVMYL RKKDGRLEEI GRTEVILNNL
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI
Arabidopsis Description
BON3Protein BONZAI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XQC7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.