Factsheet for TraesCS6D01G057900.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G074300.2	Wheat	cytosol	97.29	97.29
TraesCS1D01G236200.1	Wheat	cytosol	91.36	91.36
TraesCS6A01G058200.2	Wheat	cytosol, plastid	97.12	90.52
HORVU6Hr1G010680.1	Barley	cytosol	91.02	90.4
Os05t0373300-01	Rice	plasma membrane	80.51	79.7
KXG21864	Sorghum	cytosol	78.64	79.32
Zm00001d037872_P001	Maize	plasma membrane	77.12	77.25
GSMUA_Achr5P08050_001	Banana	cytosol	68.31	67.85
VIT_18s0001g15760.t01	Wine grape	cytosol, extracellular	10.51	64.58
VIT_18s0072g00560.t01	Wine grape	peroxisome	18.31	64.29
VIT_14s0030g00550.t01	Wine grape	cytosol	52.03	64.23
Solyc10g045500.1.1	Tomato	cytosol	13.9	64.06
VIT_14s0030g00540.t01	Wine grape	cytosol	49.66	63.97
VIT_14s0030g00600.t01	Wine grape	cytosol	55.93	63.46
VIT_14s0030g00500.t01	Wine grape	cytosol	63.05	62.63
VIT_12s0121g00080.t01	Wine grape	cytosol	62.54	62.02
KRH68626	Soybean	cytosol	60.68	61.72
CDY22660	Canola	cytosol	60.68	61.62
CDY06335	Canola	cytosol	60.34	61.06
Bra031645.1-P	Field mustard	cytosol	60.0	60.72
AT1G08860.1	Thale cress	cytosol	59.83	60.45
KRG96891	Soybean	cytosol	60.85	60.44
KRH68625	Soybean	cytosol	60.17	60.07
VIT_14s0030g00570.t01	Wine grape	cytosol	63.22	55.92
TraesCS6D01G176800.1	Wheat	cytosol, nucleus, plastid	50.68	52.09
TraesCS5D01G378400.2	Wheat	endoplasmic reticulum, extracellular	13.05	23.69
TraesCS7D01G305600.1	Wheat	mitochondrion	15.59	22.66
TraesCS3D01G510000.1	Wheat	cytosol	12.71	21.8
TraesCS3D01G408900.1	Wheat	cytosol	16.95	21.46
TraesCS7D01G377500.1	Wheat	plastid	16.27	21.15
TraesCS7D01G377600.1	Wheat	plastid	15.76	20.35
TraesCS5D01G122000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	16.1	17.69
TraesCS3D01G509900.2	Wheat	cytosol	13.9	17.12

Protein Annotations

Gene3D:2.60.40.150	MapMan:27.2.7	Gene3D:3.40.50.410	InterPro:BONZAI	InterPro:C2B_Copine	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:Copine	GO:GO:0003674	GO:GO:0005488	GO:GO:0005544	GO:GO:0008150
GO:GO:0008219	GO:GO:0008289	GO:GO:0009987	GO:GO:0060548	InterPro:IPR000008	InterPro:IPR002035
InterPro:IPR035892	InterPro:IPR036465	PFAM:PF00168	PFAM:PF07002	PFscan:PS50004	PFscan:PS50234
PANTHER:PTHR10857	PANTHER:PTHR10857:SF108	SMART:SM00239	SMART:SM00327	SUPFAM:SSF49562	SUPFAM:SSF53300
EnsemblPlantsGene:TraesCS6D01G057900	EnsemblPlants:TraesCS6D01G057900.2	InterPro:VWF_A	TIGR:cd01459	TIGR:cd04047	TIGR:cd04048
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:27493252..27499417

Molecular Weight (calculated)

64857.2 Da

IEP (calculated)

5.614

GRAVY (calculated)

-0.211

Length

590 amino acids

Sequence
(BLAST)

001: MGGCFSGDVR GGTEAVGGGA TGAAAGQGQG QGGPNEALDH FLQGHGLRGL YTPLELSFSA SKLRDMDALS KSDPMLVVYT KMDGRLEEIG RTEVILNSLE
101: PLWITKTMIN YQFEIVQPLV FRIYDIDTKY HNTPVKMLNL AQQDFLGEAF CNLSEIVTKF NHSLSLNLRN GSGHALQGTM TVHAEETASS RMAVEMTFHC
201: LNLDNKDTFS KSDPFLRVSR LSESAVAIPI CRTEVINNNL NPVWRPITLT SQQYSSRDDP LLVECFDFDA SGNHELMGAL QTTIAQLENL YKSKAGANFY
301: SKKGQKKLKG QLFLDTFQEK VQHTFLDYIS SGFELNFMVA VDFTASNGDP RTPQSLHYID PSGRLNSYQQ AILGVSEVLQ FYDKDRRFPA WGFGAKMPQG
401: PVSHCFNLNA ITNDCEVVGF EGIMSAYSST LYSVSLSGPT LFGPVINKAA EIASHSAQYG NNRYFVLLII TDGVITDEQE TKDSIVRASD LPLSILIVGV
501: GNADFTQMRT LDADLGKRLQ SSTGRVATRD IVQFVPMREV QAGGQVTVVQ SLLEELPGQF LEYMRTRGIK PQPPQHASAP PAYPPPPPQL

Best Arabidopsis Sequence Match ( AT1G08860.1 )
(BLAST)

001: MGGCLSGDVK GGKQAIGGVQ QRPTSSTIAN NAAHNDAVDF FFRSRGQYPL FSQIELTLSA SNLLDCDITS KSDPMAVMYL RKKDGRLEEI GRTEVILNNL
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI

Arabidopsis Description

BON3Protein BONZAI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XQC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.