Factsheet for TraesCS7D01G305600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G308900.1	Wheat	mitochondrion	96.31	97.51
TraesCS7B01G208900.1	Wheat	mitochondrion	90.64	87.62
Os08t0135400-01	Rice	plasma membrane	82.02	83.04
Zm00001d035211_P001	Maize	mitochondrion	82.02	82.43
EES13310	Sorghum	mitochondrion	82.27	81.86
KRH43661	Soybean	cytosol	59.11	71.43
GSMUA_AchrUn_...	Banana	mitochondrion	70.94	69.23
GSMUA_Achr7P03440_001	Banana	cytosol	52.46	68.05
CDX67997	Canola	cytosol	59.11	63.49
VIT_19s0085g01000.t01	Wine grape	extracellular	60.1	63.38
CDX79314	Canola	cytosol, plastid	58.62	62.8
CDX87387	Canola	plastid	60.34	60.95
CDX88533	Canola	plastid	60.1	60.55
Bra035112.1-P	Field mustard	plastid	59.85	60.45
AT1G79380.1	Thale cress	mitochondrion	59.36	60.1
CDY50776	Canola	cytosol	10.59	58.11
CDX99619	Canola	cytosol	9.61	57.35
KRH13149	Soybean	cytosol, plastid	58.87	57.31
Solyc05g053870.2.1	Tomato	plastid	62.81	56.54
KRH44829	Soybean	nucleus, plastid	58.87	56.24
PGSC0003DMT400040712	Potato	nucleus, plastid	62.81	52.69
TraesCS3D01G510000.1	Wheat	cytosol	43.84	51.74
TraesCS7D01G377600.1	Wheat	plastid	56.16	49.89
TraesCS7D01G377500.1	Wheat	plastid	54.43	48.68
TraesCS3D01G408900.1	Wheat	cytosol	55.42	48.28
TraesCS5D01G378400.2	Wheat	endoplasmic reticulum, extracellular	37.68	47.08
TraesCS5D01G122000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	55.42	41.9
TraesCS3D01G509900.2	Wheat	cytosol	46.55	39.46
TraesCS6D01G057900.2	Wheat	cytosol	22.66	15.59
TraesCS1D01G236200.1	Wheat	cytosol	22.17	15.25
TraesCS6D01G176800.1	Wheat	cytosol, nucleus, plastid	18.97	13.41

Protein Annotations

MapMan:19.2.2.1.5.3.2	MapMan:19.2.2.1.6.2	Gene3D:3.30.40.10	InterPro:Copine	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006464	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009605	GO:GO:0009607	GO:GO:0009611	GO:GO:0009719	GO:GO:0009867	GO:GO:0009987
GO:GO:0016740	GO:GO:0019538	GO:GO:0042742	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083
InterPro:IPR036465	PFAM:PF07002	PFAM:PF13920	PFscan:PS50089	PANTHER:PTHR10857	PANTHER:PTHR10857:SF47
SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS7D01G305600	EnsemblPlants:TraesCS7D01G305600.1	InterPro:VWF_A
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	TIGR:cd16729	SEG:seg	InterPro:vWFA_dom_sf	:

Description

No Description!

Coordinates

chr7D:-:386906817..386908952

Molecular Weight (calculated)

43991.1 Da

IEP (calculated)

6.908

GRAVY (calculated)

-0.284

Length

406 amino acids

Sequence
(BLAST)

001: MGGVLSALLG GHRRRAAQAG RTTTSRSAEP SGYGRGGAGE QRRRAMLSKK YSYIPDTYTS LDQVASALRD QGLESSNLIL GVDFTKSNEW TGKRSFNGQS
101: LHKLGDAPNP YEAAISIIGK TLASFDEDNL IPCFGFGDAT THDYNVFSFH PDNSPCHGFE EVLACYRNVV PHLRLSGPTS FAPIVEAAVD IVDRTGGQYH
201: VLVIVADGQV TRSVDTSEGD LSPQERRTVD SIVMASSYPL SIVLVGVGDG PWEDMQKFDD KLPARAFDNF QFVNFTSIMS RNATLQQKES AFALAALMEV
301: PIQYKATMEL GILGRSTGKA KRVVPAPPPL PASAQRQPSS LRLEASSANA AAAEPREDQV CPICLTNAKD LAFGCGHMCC RECGENLDRC PICRETIRSK
401: LRLYTG

Best Arabidopsis Sequence Match ( AT1G79380.1 )
(BLAST)

001: MTMGNFLKRF GSGKSRSSRN MTLGTTSSQS HEPSPSDPSL SLADNTNATK KKYALIPDRF SSLDQVSKAL REAGLESSNL ILGVDFTKSN EWTGKTSFDG
101: KCLHALGETS NPYEKAIFVI GQTLAPFDED NLIPCFGFGD STTHDEEVFG FHSDNSPCHG FEEVLACYKR IAPNLRLSGP TSYGPLIDAA VDIVEKNNGQ
201: FHVLVIVADG QVTRGTDMAE GELSQQEKTT IDAIVNASSY ALSIVLVGVG DGPWEDMRKF DDKIPKREFD NFQFVNFTEI MTRNSPESAK ETAFALAALM
301: EIPFQYQAAI ELRLLGKQTG LAKTIVPRPP PIPYTPPTNA ELPSTASPAS PEQTQSCPIC LTNRKDVAFS CGHMTCGDCG SKISNCPICR VRITNRLKLY
401: T

Arabidopsis Description

RGLG4E3 ubiquitin-protein ligase RGLG4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAL0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.