Factsheet for TraesCS7A01G308900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G305600.1	Wheat	mitochondrion	97.51	96.31
TraesCS7B01G208900.1	Wheat	mitochondrion	93.02	88.81
Os08t0135400-01	Rice	plasma membrane	83.54	83.54
Zm00001d035211_P001	Maize	mitochondrion	82.29	81.68
EES13310	Sorghum	mitochondrion	82.79	81.37
KRH43661	Soybean	cytosol	59.85	71.43
GSMUA_AchrUn_...	Banana	mitochondrion	71.07	68.51
GSMUA_Achr7P03440_001	Banana	cytosol	52.37	67.09
CDX67997	Canola	cytosol	60.35	64.02
VIT_19s0085g01000.t01	Wine grape	extracellular	61.1	63.64
CDX79314	Canola	cytosol, plastid	59.85	63.32
CDX87387	Canola	plastid	61.6	61.44
CDX88533	Canola	plastid	61.35	61.04
Bra035112.1-P	Field mustard	plastid	61.1	60.95
AT1G79380.1	Thale cress	mitochondrion	60.35	60.35
CDY50776	Canola	cytosol	10.72	58.11
KRH13149	Soybean	cytosol, plastid	60.35	58.03
CDX99619	Canola	cytosol	9.73	57.35
Solyc05g053870.2.1	Tomato	plastid	64.09	56.98
KRH44829	Soybean	nucleus, plastid	60.1	56.71
TraesCS3A01G503400.1	Wheat	cytosol	50.87	53.4
PGSC0003DMT400040712	Potato	nucleus, plastid	64.09	53.1
TraesCS7A01G381300.1	Wheat	plastid	56.36	49.45
TraesCS7A01G381200.1	Wheat	cytosol, plastid	53.87	48.98
TraesCS5A01G368900.1	Wheat	endoplasmic reticulum, extracellular	38.15	48.42
TraesCS3A01G414400.2	Wheat	cytosol	50.12	46.1
TraesCS3A01G503300.1	Wheat	cytosol	47.13	39.54
TraesCS5A01G103800.2	Wheat	endoplasmic reticulum, extracellular, golgi	55.11	39.53
TraesCS1A01G236100.4	Wheat	cytosol	22.44	15.25
TraesCS6A01G058200.2	Wheat	cytosol, plastid	22.94	14.53
TraesCS6A01G189800.1	Wheat	cytosol	18.95	13.24
TraesCS7A01G414000.1	Wheat	cytosol	17.96	12.24

Protein Annotations

MapMan:19.2.2.1.5.3.2	MapMan:19.2.2.1.6.2	Gene3D:3.30.40.10	InterPro:Copine	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006464	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009605	GO:GO:0009607	GO:GO:0009611	GO:GO:0009719	GO:GO:0009867	GO:GO:0009987
GO:GO:0016740	GO:GO:0019538	GO:GO:0042742	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083
InterPro:IPR036465	PFAM:PF07002	PFAM:PF13920	PFscan:PS50089	PANTHER:PTHR10857	PANTHER:PTHR10857:SF47
SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS7A01G308900	EnsemblPlants:TraesCS7A01G308900.1	InterPro:VWF_A
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	TIGR:cd16729	SEG:seg	InterPro:vWFA_dom_sf	:

Description

No Description!

Coordinates

chr7A:-:436891720..436893781

Molecular Weight (calculated)

43553.7 Da

IEP (calculated)

6.966

GRAVY (calculated)

-0.285

Length

401 amino acids

Sequence
(BLAST)

001: MGGVLSALLG GHRRRAAEAR RMTMSRSGEP SGHGRGGGGE QRRRAMLSKK YSYIPDTFTS LDQVASALRD QGLESSNLIL GVDFTKSNEW TGKRSFNGQS
101: LHKLGDAPNP YEAAISIIGK TLAPFDEDNL IPCFGFGDAT THDYNVFSFH PDNSPCHGFE EVLACYRNVV PHLRLSGPTS FAPIVEAAVD IVDRTGGQYH
201: VLVIVADGQV TRSVDTSEGD LSPQERRTVD SIVMASSYPL SIVLVGVGDG PWEDMQKFDD KLPARAFDNF QFVNFTSIMS RNATLQQKES AFALAALMEV
301: PIQYKATMEL GILGRSTGKA KRVVPAPPPL PASSSLRREA SSANAAAAEP REDQVCPICL TNAKDLAFGC GHMCCRECGE NLDRCPICRE TIRSKLRLYT
401: G

Best Arabidopsis Sequence Match ( AT1G79380.1 )
(BLAST)

001: MTMGNFLKRF GSGKSRSSRN MTLGTTSSQS HEPSPSDPSL SLADNTNATK KKYALIPDRF SSLDQVSKAL REAGLESSNL ILGVDFTKSN EWTGKTSFDG
101: KCLHALGETS NPYEKAIFVI GQTLAPFDED NLIPCFGFGD STTHDEEVFG FHSDNSPCHG FEEVLACYKR IAPNLRLSGP TSYGPLIDAA VDIVEKNNGQ
201: FHVLVIVADG QVTRGTDMAE GELSQQEKTT IDAIVNASSY ALSIVLVGVG DGPWEDMRKF DDKIPKREFD NFQFVNFTEI MTRNSPESAK ETAFALAALM
301: EIPFQYQAAI ELRLLGKQTG LAKTIVPRPP PIPYTPPTNA ELPSTASPAS PEQTQSCPIC LTNRKDVAFS CGHMTCGDCG SKISNCPICR VRITNRLKLY
401: T

Arabidopsis Description

RGLG4E3 ubiquitin-protein ligase RGLG4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAL0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.