Factsheet for TraesCS7B01G208900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G308900.1	Wheat	mitochondrion	88.81	93.02
TraesCS7D01G305600.1	Wheat	mitochondrion	87.62	90.64
Os08t0135400-01	Rice	plasma membrane	76.43	80.05
Zm00001d035211_P001	Maize	mitochondrion	74.76	77.72
EES13310	Sorghum	mitochondrion	75.48	77.7
KRH43661	Soybean	cytosol	54.52	68.15
GSMUA_Achr7P03440_001	Banana	cytosol	49.76	66.77
GSMUA_AchrUn_...	Banana	mitochondrion	64.76	65.38
CDX67997	Canola	cytosol	54.52	60.58
VIT_19s0085g01000.t01	Wine grape	extracellular	55.24	60.26
CDX79314	Canola	cytosol, plastid	54.05	59.89
CDY50776	Canola	cytosol	10.24	58.11
AT1G79380.1	Thale cress	mitochondrion	55.24	57.86
CDX87387	Canola	plastid	55.24	57.71
CDX88533	Canola	plastid	55.24	57.57
Bra035112.1-P	Field mustard	plastid	55.0	57.46
CDX99619	Canola	cytosol	9.29	57.35
KRH13149	Soybean	cytosol, plastid	55.24	55.64
Solyc05g053870.2.1	Tomato	plastid	58.57	54.55
KRH44829	Soybean	nucleus, plastid	55.0	54.35
TraesCS7B01G134400.1	Wheat	cytosol	49.52	52.13
PGSC0003DMT400040712	Potato	nucleus, plastid	58.57	50.83
TraesCS3B01G566800.1	Wheat	cytosol	45.71	50.66
TraesCS5B01G371300.1	Wheat	endoplasmic reticulum, vacuole	36.67	48.58
TraesCS7B01G283100.1	Wheat	cytosol	50.24	47.63
TraesCS7B01G283200.1	Wheat	cytosol	51.67	47.59
TraesCS5B01G111900.1	Wheat	cytosol	26.9	46.89
TraesCS3B01G449200.1	Wheat	cytosol	51.67	46.47
TraesCS3B01G566700.1	Wheat	cytosol	42.62	36.83
TraesCS6B01G074300.2	Wheat	cytosol	21.67	15.42
TraesCS1B01G247700.2	Wheat	cytosol	21.43	15.25
TraesCS6B01G235200.1	Wheat	plastid	18.33	13.34

Protein Annotations

MapMan:19.2.2.1.5.3.2	MapMan:19.2.2.1.6.2	InterPro:Copine	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605
GO:GO:0009607	GO:GO:0009611	GO:GO:0009719	GO:GO:0009867	GO:GO:0009987	GO:GO:0016740
GO:GO:0019538	GO:GO:0042742	InterPro:IPR002035	InterPro:IPR036465	PFAM:PF07002	PANTHER:PTHR10857
PANTHER:PTHR10857:SF47	SMART:SM00327	SUPFAM:SSF53300	EnsemblPlantsGene:TraesCS7B01G208900	EnsemblPlants:TraesCS7B01G208900.1	InterPro:VWF_A
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:382158161..382160228

Molecular Weight (calculated)

45564.9 Da

IEP (calculated)

6.352

GRAVY (calculated)

-0.333

Length

420 amino acids

Sequence
(BLAST)

001: MGGVLSALFG GHRRRAAEAR RMTMSRSGEP SGHGRGGGGG GEQRRRGMLS KKYSYIPDTF TSLDQVASAL RDQGLESSNL ILGVDFTKSN EWTGKRSFNG
101: QSLHKLGDAP NPYEAAISII GKTLAPFDED NLIPCFGFGD ATTHDYNVFS FHPDNSPCHG FEEVLACYRN VVPHLRLSGP TSFAPIVEAA VDIVDRTGGQ
201: YHVLVIVADG QVTRSVDTSD GDLSPQERRT VDSIVMASSY PLSIVLVGVG DGPWEDMQKF DDKLPARAFD NFQFVNFTSI MSRNATLQQK ESAFALAALM
301: EVPIQYKATM ELGILGRSTG KAKRVVPAPP PLPGSAQRQP SSFRREASGA NAAAAEPRED QVCPICLTNA KDLAFGCGHM GVWGEPRQMP DMPRDNTLQA
401: EAVHGMIDSN QNMSLYLFQM

Best Arabidopsis Sequence Match ( AT1G79380.1 )
(BLAST)

001: MTMGNFLKRF GSGKSRSSRN MTLGTTSSQS HEPSPSDPSL SLADNTNATK KKYALIPDRF SSLDQVSKAL REAGLESSNL ILGVDFTKSN EWTGKTSFDG
101: KCLHALGETS NPYEKAIFVI GQTLAPFDED NLIPCFGFGD STTHDEEVFG FHSDNSPCHG FEEVLACYKR IAPNLRLSGP TSYGPLIDAA VDIVEKNNGQ
201: FHVLVIVADG QVTRGTDMAE GELSQQEKTT IDAIVNASSY ALSIVLVGVG DGPWEDMRKF DDKIPKREFD NFQFVNFTEI MTRNSPESAK ETAFALAALM
301: EIPFQYQAAI ELRLLGKQTG LAKTIVPRPP PIPYTPPTNA ELPSTASPAS PEQTQSCPIC LTNRKDVAFS CGHMTCGDCG SKISNCPICR VRITNRLKLY
401: T

Arabidopsis Description

RGLG4E3 ubiquitin-protein ligase RGLG4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAL0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.