Factsheet for TraesCS7B01G134400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G048620.13	Barley	cytosol	96.24	96.24
Os08t0494300-01	Rice	plasma membrane	86.22	86.87
KXG25698	Sorghum	cytosol	80.45	79.85
TraesCS7B01G283200.1	Wheat	cytosol	67.42	58.99
TraesCS7B01G283100.1	Wheat	cytosol	63.41	57.11
TraesCS3B01G566800.1	Wheat	cytosol	51.13	53.83
TraesCS5B01G111900.1	Wheat	cytosol	31.58	52.28
TraesCS3B01G449200.1	Wheat	cytosol	60.65	51.82
TraesCS5B01G371300.1	Wheat	endoplasmic reticulum, vacuole	39.35	49.53
TraesCS7B01G208900.1	Wheat	mitochondrion	52.13	49.52
TraesCS3B01G566700.1	Wheat	cytosol	46.12	37.86
TraesCS1B01G247700.2	Wheat	cytosol	22.81	15.42
TraesCS6B01G074300.2	Wheat	cytosol	22.81	15.42
TraesCS6B01G235200.1	Wheat	plastid	21.3	14.73

Protein Annotations

EnsemblPlants:TraesCS7B01G134400.1	EnsemblPlantsGene:TraesCS7B01G134400	Gene3D:3.30.40.10	InterPro:Copine	InterPro:IPR001841	InterPro:IPR002035
InterPro:IPR013083	InterPro:IPR036465	InterPro:VWF_A	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:vWFA_dom_sf
PANTHER:PTHR10857	PANTHER:PTHR10857:SF97	PFAM:PF07002	PFAM:PF13920	PFscan:PS50089	SMART:SM00327
SUPFAM:SSF53300	SUPFAM:SSF57850	TIGR:cd16729	MapMan:19.2.2.1.5.3.2	MapMan:19.2.2.1.6.2	:

Description

No Description!

Coordinates

chr7B:-:164100842..164103475

Molecular Weight (calculated)

43718.4 Da

IEP (calculated)

6.564

GRAVY (calculated)

-0.434

Length

399 amino acids

Sequence
(BLAST)

001: MGAFGSKDNS SGRHHHHCNQ DHSKNAAPGG KDRFAKFGDD YHTLEQVTDA LSHAGLESSN LIVGIDFTKS NEWTGKVSFH NRSLHAIGNT PNPYEQAISI
101: IGRTLARFDE DNLIPCFGFG DATTHDQKVF SFYPENQPCD GFEQALGRYR EIVPQLRLAG PTSFAPMIET AIGIVDSSGG QYHVLLIIAD GQVTRSVDTG
201: NGQLSPQERE TIDAIVKASD YPLSIVLVGV GDGPWDMMRQ FDDNIPSRAF DNFQFVNFTE IMSRPIPTSK KEAEFALSAL MEIPAQFKAT MNLQLLGKQR
301: GFPHRSVLPP PVSVYRQPSG CSTVKQTQSP GTSYGSPQKN ASAPRQDSDV GDQQTCPICW SEAKNLAFGC GHQTCADCGK DLKVCPLCQR AISTRIRLY

Best Arabidopsis Sequence Match ( AT1G67800.4 )
(BLAST)

001: MGGSSSKESP RGGGSGRRYE RSVSGSSSYS SAWDQSSYYQ TPNHPSASPV SSYNSGRQTP KNLERKYSRI ADNYRSIDEV TAALSHAGLE SSNLIVGIDV
101: TKSNEWTGAR SFGRKSLHFI GTTPNPYQQA ISIIGKTLSV FDEDNLIPCY GFGDATTHDQ DVFSFNPNDT YCNGFEEVLM CYREIVPQLR LSGPTSFAPI
201: IERAMTIVEE SGGQYHVLLI IADGQVTRSV DTDNGGFSPQ EQQTIDAIVR ASEYPLSIVL VGVGDGPWDT MRQFDDNIPA RAFDNFQFVN FTDIMSKNID
301: PARKEAEFAL SALMEIPSQY KATLELGLLG QRTGHCPDRI ALPPPTYATQ SMRNSPRTSR STSFQNKPYD NGVSSTPPST THNESQQQFC PVCLVSAKNM
401: AFNCGHQTCA GCGEDLHVCP ICRSSISVRI KLY

Arabidopsis Description

Copine (Calcium-dependent phospholipid-binding protein) family [Source:UniProtKB/TrEMBL;Acc:F4HTR6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.