Factsheet for TraesCS1A01G236100.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G247700.2	Wheat	cytosol	98.98	98.98
TraesCS1D01G236200.1	Wheat	cytosol	97.97	97.97
TraesCS6A01G058200.2	Wheat	cytosol, plastid	92.03	85.78
HORVU1Hr1G058000.10	Barley	cytosol	95.42	85.17
Os05t0373300-01	Rice	plasma membrane	82.37	81.54
KXG21864	Sorghum	cytosol	80.51	81.2
Zm00001d037872_P001	Maize	plasma membrane	78.81	78.95
GSMUA_Achr5P08050_001	Banana	cytosol	69.49	69.02
Solyc10g045500.1.1	Tomato	cytosol	14.58	67.19
VIT_18s0001g15760.t01	Wine grape	cytosol, extracellular	10.85	66.67
VIT_14s0030g00550.t01	Wine grape	cytosol	53.39	65.9
VIT_14s0030g00540.t01	Wine grape	cytosol	51.02	65.72
VIT_18s0072g00560.t01	Wine grape	peroxisome	18.64	65.48
VIT_14s0030g00600.t01	Wine grape	cytosol	57.29	65.0
VIT_14s0030g00500.t01	Wine grape	cytosol	64.41	63.97
VIT_12s0121g00080.t01	Wine grape	cytosol	64.07	63.53
CDY22660	Canola	cytosol	61.69	62.65
CDY06335	Canola	cytosol	61.36	62.09
KRH68626	Soybean	cytosol	60.85	61.9
Bra031645.1-P	Field mustard	cytosol	61.02	61.75
AT1G08860.1	Thale cress	cytosol	60.85	61.47
KRH68625	Soybean	cytosol	60.68	60.58
KRG96891	Soybean	cytosol	60.68	60.27
VIT_14s0030g00570.t01	Wine grape	cytosol	64.58	57.12
TraesCS7A01G414000.1	Wheat	cytosol	55.93	56.12
TraesCS6A01G189800.1	Wheat	cytosol	50.85	52.26
TraesCS5A01G368900.1	Wheat	endoplasmic reticulum, extracellular	12.71	23.73
TraesCS3A01G414400.2	Wheat	cytosol	16.61	22.48
TraesCS7A01G308900.1	Wheat	mitochondrion	15.25	22.44
TraesCS3A01G503400.1	Wheat	cytosol	13.73	21.2
TraesCS7A01G381200.1	Wheat	cytosol, plastid	15.76	21.09
TraesCS7A01G381300.1	Wheat	plastid	15.93	20.57
TraesCS3A01G503300.1	Wheat	cytosol	13.39	16.53
TraesCS5A01G103800.2	Wheat	endoplasmic reticulum, extracellular, golgi	15.42	16.28

Protein Annotations

Gene3D:2.60.40.150	MapMan:27.2.7	InterPro:BONZAI	InterPro:C2B_Copine	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:Copine	GO:GO:0003674	GO:GO:0005488	GO:GO:0005544	GO:GO:0008150	GO:GO:0008219
GO:GO:0008289	GO:GO:0009987	GO:GO:0060548	InterPro:IPR000008	InterPro:IPR002035	InterPro:IPR035892
InterPro:IPR036465	PFAM:PF00168	PFAM:PF07002	PFscan:PS50004	PFscan:PS50234	PANTHER:PTHR10857
PANTHER:PTHR10857:SF108	SMART:SM00239	SMART:SM00327	SUPFAM:SSF49562	SUPFAM:SSF53300	EnsemblPlantsGene:TraesCS1A01G236100
EnsemblPlants:TraesCS1A01G236100.4	InterPro:VWF_A	TIGR:cd01459	TIGR:cd04047	TIGR:cd04048	SEG:seg
InterPro:vWFA_dom_sf	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:418050433..418057131

Molecular Weight (calculated)

64940.3 Da

IEP (calculated)

5.923

GRAVY (calculated)

-0.185

Length

590 amino acids

Sequence
(BLAST)

001: MGGCFSGDVR GGMEAVGGGA RGATAAAGQC QGQGGPNEAV DHFFQGQALR LYTPLELSFS ASKLRNMDAL SKSDPMLVVY TKMDGRLEEI GRTEVILNSL
101: EPLWITKAMI NYQFEIVQPL VFRIYDVDTK YHNTPLKMLN LAQQDFLGEA FCNLSEIVTK FNHSLTLNLR NGSGHALQGT VTVHAEETAS SRMAVDMQFH
201: CLNLDNKDTF SKSDPFLRVS RLSESAVAIP ICKTEVIKNN LNPVWRPITL TSQQYSSKDD PLLVECFDFD ASGNHELIGA LQTTIAQLEN LYNSKAGANF
301: YSHKGQKKLK GQLFLDKFQE KVQHTFLDYI SSGFELNFMV AVDFTASNGD PRVPQSLHYI DPSGRPNSYQ QAILGVSEVL QFYDNDRRFP AWGFGAKIPR
401: GSVSHCFNLN ASTNDCEVVG VEGIMSAYSS TLYSVSLAGP TLFGPVISKA AEIASHSVQY GNNKYFVLLI ITDGVITDQQ ETKDSIVRAS DLPLSILIVG
501: VGNADFTQMR ILDADFGKRL ESSTGRVATR DIVQFVPMRE VQAGGQVTVV QSLLEELPGQ FLEYMRTRDI KPRPPQHASA PPAYPPPPQL

Best Arabidopsis Sequence Match ( AT1G08860.1 )
(BLAST)

001: MGGCLSGDVK GGKQAIGGVQ QRPTSSTIAN NAAHNDAVDF FFRSRGQYPL FSQIELTLSA SNLLDCDITS KSDPMAVMYL RKKDGRLEEI GRTEVILNNL
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI

Arabidopsis Description

BON3Protein BONZAI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XQC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.