CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH00634
KRH00635
KRH28237
KRH48228
KRH48229
KRH48230
KRH48231
KRH48232
KRH48233
KRH65133
KRH65134
KRH65135
KRH65136
KRH65137
KRH65138
KRH65139
KRH77255

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G08860.1	KRH00634	AT2G45760.1	17631528
AT1G08860.1	KRH00635	AT2G45760.1	17631528
AT1G08860.1	KRH28237	AT2G45760.1	17631528
AT1G08860.1	KRH48228	AT2G45760.1	17631528
AT1G08860.1	KRH48229	AT2G45760.1	17631528
AT1G08860.1	KRH48230	AT2G45760.1	17631528
AT1G08860.1	KRH48231	AT2G45760.1	17631528
AT1G08860.1	KRH48232	AT2G45760.1	17631528
AT1G08860.1	KRH48233	AT2G45760.1	17631528
AT1G08860.1	KRH65133	AT2G45760.1	17631528
AT1G08860.1	KRH65134	AT2G45760.1	17631528
AT1G08860.1	KRH65135	AT2G45760.1	17631528
AT1G08860.1	KRH65136	AT2G45760.1	17631528
AT1G08860.1	KRH65137	AT2G45760.1	17631528
AT1G08860.1	KRH65138	AT2G45760.1	17631528
AT1G08860.1	KRH65139	AT2G45760.1	17631528
AT1G08860.1	KRH77255	AT2G45760.1	17631528

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68625	Soybean	cytosol	91.92	92.39
KRH68626	Soybean	cytosol	83.84	85.86
VIT_14s0030g00550.t01	Wine grape	cytosol	57.24	71.13
VIT_14s0030g00600.t01	Wine grape	cytosol	62.12	70.96
VIT_14s0030g00540.t01	Wine grape	cytosol	53.87	69.87
VIT_12s0121g00080.t01	Wine grape	cytosol	69.53	69.41
VIT_14s0030g00500.t01	Wine grape	cytosol	68.01	68.01
VIT_18s0072g00560.t01	Wine grape	peroxisome	19.02	67.26
VIT_18s0001g15760.t01	Wine grape	cytosol, extracellular	10.77	66.67
Solyc10g045500.1.1	Tomato	cytosol	14.14	65.62
Bra031645.1-P	Field mustard	cytosol	64.31	65.52
CDY06335	Canola	cytosol	64.14	65.35
CDY22660	Canola	cytosol	63.8	65.23
AT1G08860.1	Thale cress	cytosol	63.97	65.07
GSMUA_Achr5P08050_001	Banana	cytosol	64.98	64.98
VIT_14s0030g00570.t01	Wine grape	cytosol	69.87	62.22
KXG21864	Sorghum	cytosol	60.44	61.37
TraesCS6D01G057900.2	Wheat	cytosol	60.44	60.85
TraesCS6B01G074300.2	Wheat	cytosol	60.27	60.68
TraesCS1B01G247700.2	Wheat	cytosol	60.27	60.68
TraesCS1A01G236100.4	Wheat	cytosol	60.27	60.68
TraesCS1D01G236200.1	Wheat	cytosol	60.1	60.51
Zm00001d037872_P001	Maize	plasma membrane	59.93	60.44
Os05t0373300-01	Rice	plasma membrane	59.93	59.73
HORVU6Hr1G010680.1	Barley	cytosol	58.92	58.92
KRH41052	Soybean	endoplasmic reticulum	57.24	58.62
KRH54085	Soybean	cytosol	56.06	57.61
TraesCS6A01G058200.2	Wheat	cytosol, plastid	59.93	56.24
KRH20017	Soybean	cytosol	25.76	56.04
HORVU1Hr1G058000.10	Barley	cytosol	59.76	53.71
KRH63871	Soybean	cytosol	54.38	51.93
TraesCS7A01G414000.1	Wheat	cytosol	43.6	44.05
KRH07106	Soybean	cytosol, plastid	14.48	29.55
KRG94356	Soybean	nucleus	17.17	23.83
KRH63659	Soybean	cytosol, mitochondrion, nucleus, plastid	17.0	23.65
KRH54288	Soybean	cytosol, mitochondrion, nucleus, plastid	16.5	22.9
KRH43661	Soybean	cytosol	12.79	22.62
KRH43098	Soybean	endoplasmic reticulum, golgi	16.84	21.74
KRG97516	Soybean	golgi, plasma membrane	16.67	21.57
KRH64018	Soybean	nucleus	15.66	21.53
KRH59243	Soybean	endoplasmic reticulum, golgi	16.67	21.52
KRH31355	Soybean	golgi, plasma membrane	16.67	21.38
KRH59596	Soybean	nucleus	15.32	21.36
KRH40948	Soybean	nucleus	12.63	21.01
KRH58251	Soybean	nucleus	16.84	20.37
KRG93947	Soybean	nucleus	16.67	19.96
KRH13149	Soybean	cytosol, plastid	13.64	19.42
KRH44829	Soybean	nucleus, plastid	13.8	19.29
KRH53919	Soybean	nucleus	10.61	16.8
KRG95016	Soybean	nucleus, peroxisome, plasma membrane	9.43	15.47
KRH13151	Soybean	nucleus, vacuole	9.43	10.49
KRH13085	Soybean	extracellular, vacuole	8.42	9.58
KRH44837	Soybean	extracellular, golgi	8.08	9.3
KRH07102	Soybean	cytosol	2.19	9.29
KRH44834	Soybean	plasma membrane	7.41	8.98

Protein Annotations

EntrezGene:100818746	Gene3D:2.60.40.150	MapMan:27.2.7	EMBL:ACUP02012168	InterPro:BONZAI	InterPro:C2B_Copine
InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:Copine	EnsemblPlantsGene:GLYMA_19G239500	GO:GO:0003674	GO:GO:0005488
GO:GO:0005544	GO:GO:0008150	GO:GO:0008219	GO:GO:0008289	GO:GO:0009987	GO:GO:0060548
UniProt:I1NC38	InterPro:IPR000008	InterPro:IPR002035	InterPro:IPR035892	InterPro:IPR036465	EnsemblPlants:KRG96891
ProteinID:KRG96891	ProteinID:KRG96891.1	PFAM:PF00168	PFAM:PF07002	PFscan:PS50004	PANTHER:PTHR10857
PANTHER:PTHR10857:SF108	SMART:SM00239	SMART:SM00327	SUPFAM:SSF49562	SUPFAM:SSF53300	UniParc:UPI000233EA1D
InterPro:VWF_A	SEG:seg	InterPro:vWFA_dom_sf	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:48772556..48782720

Molecular Weight (calculated)

65024.5 Da

IEP (calculated)

5.470

GRAVY (calculated)

-0.108

Length

594 amino acids

Sequence
(BLAST)

001: MGTCFSDIKG GKQAVGGKSN EATGTGATTN NNGGQNDAVD FFYKTQGFQQ LFTQVELSLS ASNLLDLDIA SKSDPMVVVY AKKRDGKLEE LGRTEVILNC
101: LNPEWIEKIS VAFHFEIVQP LEFHVYDIDT KYHSVPTKTL KLGDQEFLGM TSCTLSEIVT KPSRSLSLRL QNKSGHGVLR NLGAITIHAE ETVASKSAVE
201: MVLSCSHLDN KDVFSKSDPF LRISRMIESG GYIPICKTEV INDNLNPKWK PVCLSGHKFG SKDSPLVIEC FDFNSSGDHV LIGKVQKSVA DLEKLYGERT
301: GVNLIIPSTR HRQEKVLKGQ LFVDQYCEKE QFSFIDYISS GFELNFMVAV DFTASNGNPQ HSDSLHYIDA YGRLNSYQQA IMEVGEVIQF YDSDRQFPAW
401: GFGGKIPGGT VSHCFNLCGN PGASEVAGVE GIMDAYASAL CRVTLSGPTL FGPVINMAAQ IASHALTSHC STKYYVLLII TDGVVTDLQE TINALVEASD
501: LPLSILIVGV GSADFTSMEV LDADNGRRLE SSTGRVATRD MVQFVPMREV QSGQISVVRA LLEELPDQFL SFMRSRGINP LPSHFSKAST STMQ

Best Arabidopsis Sequence Match ( AT1G08860.1 )
(BLAST)

001: MGGCLSGDVK GGKQAIGGVQ QRPTSSTIAN NAAHNDAVDF FFRSRGQYPL FSQIELTLSA SNLLDCDITS KSDPMAVMYL RKKDGRLEEI GRTEVILNNL
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI

Arabidopsis Description

BON3Protein BONZAI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XQC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.