CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH00634
KRH00635
KRH28237
KRH48228
KRH48229
KRH48230
KRH48231
KRH48232
KRH48233
KRH65133
KRH65134
KRH65135
KRH65136
KRH65137
KRH65138
KRH65139
KRH77255

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G08860.1	KRH00634	AT2G45760.1	17631528
AT1G08860.1	KRH00635	AT2G45760.1	17631528
AT1G08860.1	KRH28237	AT2G45760.1	17631528
AT1G08860.1	KRH48228	AT2G45760.1	17631528
AT1G08860.1	KRH48229	AT2G45760.1	17631528
AT1G08860.1	KRH48230	AT2G45760.1	17631528
AT1G08860.1	KRH48231	AT2G45760.1	17631528
AT1G08860.1	KRH48232	AT2G45760.1	17631528
AT1G08860.1	KRH48233	AT2G45760.1	17631528
AT1G08860.1	KRH65133	AT2G45760.1	17631528
AT1G08860.1	KRH65134	AT2G45760.1	17631528
AT1G08860.1	KRH65135	AT2G45760.1	17631528
AT1G08860.1	KRH65136	AT2G45760.1	17631528
AT1G08860.1	KRH65137	AT2G45760.1	17631528
AT1G08860.1	KRH65138	AT2G45760.1	17631528
AT1G08860.1	KRH65139	AT2G45760.1	17631528
AT1G08860.1	KRH77255	AT2G45760.1	17631528

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68625	Soybean	cytosol	87.93	86.29
KRG96891	Soybean	cytosol	85.86	83.84
VIT_14s0030g00550.t01	Wine grape	cytosol	59.14	71.76
VIT_14s0030g00600.t01	Wine grape	cytosol	64.14	71.54
VIT_14s0030g00540.t01	Wine grape	cytosol	55.34	70.09
VIT_12s0121g00080.t01	Wine grape	cytosol	71.55	69.75
VIT_18s0001g15760.t01	Wine grape	cytosol, extracellular	11.38	68.75
VIT_14s0030g00500.t01	Wine grape	cytosol	70.34	68.69
AT1G08860.1	Thale cress	cytosol	66.21	65.75
Bra031645.1-P	Field mustard	cytosol	66.03	65.69
CDY06335	Canola	cytosol	66.03	65.69
CDY22660	Canola	cytosol	65.17	65.06
VIT_18s0072g00560.t01	Wine grape	peroxisome	18.79	64.88
Solyc10g045500.1.1	Tomato	cytosol	14.31	64.84
GSMUA_Achr5P08050_001	Banana	cytosol	65.86	64.31
VIT_14s0030g00570.t01	Wine grape	cytosol	71.72	62.37
KXG21864	Sorghum	cytosol	62.07	61.54
Zm00001d037872_P001	Maize	plasma membrane	61.9	60.95
TraesCS1B01G247700.2	Wheat	cytosol	61.9	60.85
TraesCS1A01G236100.4	Wheat	cytosol	61.9	60.85
TraesCS1D01G236200.1	Wheat	cytosol	61.72	60.68
TraesCS6D01G057900.2	Wheat	cytosol	61.72	60.68
TraesCS6B01G074300.2	Wheat	cytosol	61.38	60.34
Os05t0373300-01	Rice	plasma membrane	61.38	59.73
KRH41052	Soybean	endoplasmic reticulum	57.93	57.93
HORVU6Hr1G010680.1	Barley	cytosol	58.97	57.58
KRH20017	Soybean	cytosol	26.9	57.14
KRH54085	Soybean	cytosol	56.03	56.23
TraesCS6A01G058200.2	Wheat	cytosol, plastid	60.69	55.61
HORVU1Hr1G058000.10	Barley	cytosol	61.38	53.86
KRH63871	Soybean	cytosol	54.83	51.13
TraesCS7A01G414000.1	Wheat	cytosol	44.14	43.54
KRH07106	Soybean	cytosol, plastid	14.48	28.87
KRH43661	Soybean	cytosol	14.14	24.4
KRH63659	Soybean	cytosol, mitochondrion, nucleus, plastid	17.07	23.18
KRG94356	Soybean	nucleus	17.07	23.13
KRH54288	Soybean	cytosol, mitochondrion, nucleus, plastid	16.55	22.43
KRH64018	Soybean	nucleus	16.38	21.99
KRH31355	Soybean	golgi, plasma membrane	17.41	21.81
KRG97516	Soybean	golgi, plasma membrane	17.24	21.79
KRH59243	Soybean	endoplasmic reticulum, golgi	17.24	21.74
KRH40948	Soybean	nucleus	13.28	21.57
KRH43098	Soybean	endoplasmic reticulum, golgi	17.07	21.52
KRH59596	Soybean	nucleus	15.69	21.36
KRH58251	Soybean	nucleus	17.24	20.37
KRH13149	Soybean	cytosol, plastid	14.48	20.14
KRH44829	Soybean	nucleus, plastid	14.66	20.0
KRG93947	Soybean	nucleus	17.07	19.96
KRH53919	Soybean	nucleus	10.34	16.0
KRG95016	Soybean	nucleus, peroxisome, plasma membrane	9.83	15.75
KRH13151	Soybean	nucleus, vacuole	10.69	11.61
KRH44837	Soybean	extracellular, golgi	8.79	9.88
KRH44834	Soybean	plasma membrane	8.28	9.8
KRH13085	Soybean	extracellular, vacuole	8.62	9.58
KRH07102	Soybean	cytosol	2.24	9.29

Protein Annotations

EntrezGene:100788074	Gene3D:2.60.40.150	MapMan:27.2.7	Gene3D:3.40.50.410	EMBL:ACUP02002121	InterPro:BONZAI
InterPro:C2B_Copine	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:Copine	EnsemblPlantsGene:GLYMA_03G242200	GO:GO:0003674
GO:GO:0005488	GO:GO:0005544	GO:GO:0008150	GO:GO:0008219	GO:GO:0008289	GO:GO:0009987
GO:GO:0060548	UniProt:I1JRH6	InterPro:IPR000008	InterPro:IPR002035	InterPro:IPR035892	InterPro:IPR036465
EnsemblPlants:KRH68626	ProteinID:KRH68626	ProteinID:KRH68626.1	PFAM:PF00168	PFAM:PF07002	PFscan:PS50004
PFscan:PS50234	PANTHER:PTHR10857	PANTHER:PTHR10857:SF108	SMART:SM00239	SMART:SM00327	SUPFAM:SSF49562
SUPFAM:SSF53300	UniParc:UPI00023377B4	InterPro:VWF_A	SEG:seg	InterPro:vWFA_dom_sf	:

Description

hypothetical protein

Coordinates

chr3:-:44018392..44025758

Molecular Weight (calculated)

64164.8 Da

IEP (calculated)

6.127

GRAVY (calculated)

-0.148

Length

580 amino acids

Sequence
(BLAST)

001: MGGCFSDVKG GKQAVGVGGN GAHNDALDLF YKSHQMFTQL ELSLSASNLL DRDITSKSDP MVVVYAKKRD GKMEEIGRTE VILNCLNPEW IEKISVAFHF
101: EIVQPLEFHV YDVDTKYHSV PTTTLKLGDQ DFLGMASCTL SEIVTKPSRS LSLRLKNKSR HDVLRNLGEI TVHAEETVAS RSAVEMVLRC THLDNKDFFS
201: KSDPFLRISR MVETGGYVPI CKTEVIDDNL NPKWKPLCLS VQKFGNKDNP LLIECFDFNS SGNHVLIGKM QKSVADLEKL YKERTGANFV IPSTRHRQEK
301: VLKGQLFVDQ YCVKEQISFI DYISSGFELN FMVAIDLTAS NGNPHHSDSL HYIDAYGRLN SYQKAVMEVG EVIQFYDSDR QFPAWGFGGK LPGGTVSHCF
401: NLNGNPGASE VVGVEGIMDA YASALRSVTL SGPTLFGPVI NMAAQMAVQS ITSHNNTKYY VLLIITDGVV TDLQETINAV VKASDLPLSI LIVGVGNADF
501: KSMEVLDADN GRRLESPTGR VATRDIVQFI PMREVQSGQI SVVQALLEEL PDQFLSFMRS RDVKPLPCSD FPQASSSTVK

Best Arabidopsis Sequence Match ( AT1G08860.1 )
(BLAST)

001: MGGCLSGDVK GGKQAIGGVQ QRPTSSTIAN NAAHNDAVDF FFRSRGQYPL FSQIELTLSA SNLLDCDITS KSDPMAVMYL RKKDGRLEEI GRTEVILNNL
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI

Arabidopsis Description

BON3Protein BONZAI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XQC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.