Factsheet for Zm00001d037872_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

plasma membrane: 23353019

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG21864	Sorghum	cytosol	92.36	92.99
Os05t0373300-01	Rice	plasma membrane	81.83	80.87
TraesCS1D01G236200.1	Wheat	cytosol	79.12	78.98
TraesCS1A01G236100.4	Wheat	cytosol	78.95	78.81
TraesCS1B01G247700.2	Wheat	cytosol	78.61	78.47
TraesCS6B01G074300.2	Wheat	cytosol	77.76	77.63
TraesCS6D01G057900.2	Wheat	cytosol	77.25	77.12
HORVU6Hr1G010680.1	Barley	cytosol	74.19	73.57
VIT_18s0001g15760.t01	Wine grape	cytosol, extracellular	11.71	71.88
TraesCS6A01G058200.2	Wheat	cytosol, plastid	77.08	71.72
HORVU1Hr1G058000.10	Barley	cytosol	77.42	68.99
GSMUA_Achr5P08050_001	Banana	cytosol	68.59	68.01
Solyc10g045500.1.1	Tomato	cytosol	14.26	65.62
VIT_18s0072g00560.t01	Wine grape	peroxisome	18.51	64.88
VIT_14s0030g00550.t01	Wine grape	cytosol	52.46	64.64
VIT_14s0030g00600.t01	Wine grape	cytosol	57.05	64.62
VIT_14s0030g00540.t01	Wine grape	cytosol	50.08	64.41
VIT_14s0030g00500.t01	Wine grape	cytosol	64.01	63.47
VIT_12s0121g00080.t01	Wine grape	cytosol	63.67	63.03
CDY22660	Canola	cytosol	62.14	62.99
CDY06335	Canola	cytosol	62.14	62.78
Bra031645.1-P	Field mustard	cytosol	61.97	62.61
AT1G08860.1	Thale cress	cytosol	61.97	62.5
KRH68626	Soybean	cytosol	60.95	61.9
KRH68625	Soybean	cytosol	61.46	61.25
KRG96891	Soybean	cytosol	60.44	59.93
VIT_14s0030g00570.t01	Wine grape	cytosol	63.84	56.37
Zm00001d016615_P002	Maize	plasma membrane	48.56	52.57
TraesCS7A01G414000.1	Wheat	cytosol	51.78	51.87
Zm00001d048784_P001	Maize	cytosol	14.6	27.92
Zm00001d041244_P001	Maize	extracellular	4.58	25.23
Zm00001d024705_P001	Maize	cytosol	3.74	23.4
Zm00001d034150_P001	Maize	cytosol	6.62	23.08
Zm00001d042437_P005	Maize	cytosol	18.0	22.46
Zm00001d046554_P003	Maize	cytosol, plastid	16.3	21.57
Zm00001d036831_P006	Maize	cytosol	16.64	21.4
Zm00001d035211_P001	Maize	mitochondrion	14.43	21.04
Zm00001d005369_P001	Maize	mitochondrion	4.24	20.49
Zm00001d012101_P002	Maize	mitochondrion	17.49	20.28
Zm00001d011821_P007	Maize	cytosol	13.75	18.88
Zm00001d041073_P001	Maize	endoplasmic reticulum, golgi, vacuole	15.79	17.19
Zm00001d006136_P001	Maize	cytosol	2.38	14.43

Protein Annotations

EntrezGene:100381409	Gene3D:2.60.40.150	MapMan:27.2.7	ProteinID:AQK85069.1	InterPro:BONZAI	EMBL:BT061178
EMBL:BT061190	UniProt:C0HFS2	InterPro:C2B_Copine	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:Copine
GO:GO:0003674	GO:GO:0005488	GO:GO:0005544	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0008150	GO:GO:0008219	GO:GO:0008289	GO:GO:0009987	GO:GO:0016020	GO:GO:0060548
GO:GO:0090332	InterPro:IPR000008	InterPro:IPR002035	InterPro:IPR035892	InterPro:IPR036465	PFAM:PF00168
PFAM:PF07002	PFscan:PS50004	PFscan:PS50234	PANTHER:PTHR10857	PANTHER:PTHR10857:SF108	SMART:SM00239
SMART:SM00327	SUPFAM:SSF49562	SUPFAM:SSF53300	UniParc:UPI00019489A7	InterPro:VWF_A	EnsemblPlantsGene:Zm00001d037872
EnsemblPlants:Zm00001d037872_P001	EnsemblPlants:Zm00001d037872_T001	SEG:seg	InterPro:vWFA_dom_sf	:	:

Description

Protein BONZAI 3

Coordinates

chr6:-:140520704..140530053

Molecular Weight (calculated)

65049.3 Da

IEP (calculated)

5.351

GRAVY (calculated)

-0.203

Length

589 amino acids

Sequence
(BLAST)

001: MGGCFSVHGD VRGGMEGVGG GARTQGGAAS SSAQQGGPND AVDYFFQTRG LRGLYTPIEL SFSASKLRNT DSFSKSDPML VVYTNIKGKL EEIGRTEVIL
101: NSLEPSWITK VTMSYQFEIV QPLIFRIYDV DTKYHNTPVK TLNLTQQDFL GVACCNLSEI VTKFNRSLTL NLQSDCGHGL HGTMTVHAEE SDSSRMAVEM
201: TLRCVNLENK DVFSKSDPFL RISKLVETAG PIPICKTEVV PDNLNPVWRP ITLTSQQYGS KDNPLLVECF DFNSSGDHEL IGAFQTTITQ LENLYTSKSA
301: AIFYNHKGQR KMKEQLFVDK FQETVQHTFL DYISSGFELN FMVAIDFTAS NGDPRVPQSL HYIDPSGRPN SYQQAMLGVG EVLQFYDNDR RFPTWGFGAR
401: VHGYVSHCFN LNTATNDSEV VGVEGIMSAY TSSLYSVSLA GPTMFGPVIN KAADIASQSL QYSNNKYFVL LIITDGVLTD IQETKDCIVR ASDLPLSILI
501: VGVGNADFKQ MEILDADNGK RLESSTGRIA TRDIVQFVPM REVQGGEISV VQSLLEELPG QFLQYMRTRG IKPQRAPGLA SAPVYPPQQ

Best Arabidopsis Sequence Match ( AT1G08860.1 )
(BLAST)

001: MGGCLSGDVK GGKQAIGGVQ QRPTSSTIAN NAAHNDAVDF FFRSRGQYPL FSQIELTLSA SNLLDCDITS KSDPMAVMYL RKKDGRLEEI GRTEVILNNL
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI

Arabidopsis Description

BON3Protein BONZAI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XQC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.