Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- peroxisome 2
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_15s0048g02070.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G08860.1 | VIT_15s0048g02070.t01 | AT2G45760.1 | 17631528 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g15760.t01 | Wine grape | cytosol, extracellular | 40.48 | 70.83 |
| VIT_14s0030g00540.t01 | Wine grape | cytosol | 86.31 | 31.66 |
| VIT_14s0030g00550.t01 | Wine grape | cytosol | 87.5 | 30.75 |
| VIT_14s0030g00600.t01 | Wine grape | cytosol | 84.52 | 27.31 |
| VIT_14s0030g00500.t01 | Wine grape | cytosol | 88.1 | 24.92 |
| VIT_12s0121g00080.t01 | Wine grape | cytosol | 85.71 | 24.2 |
| Solyc10g045500.1.1 | Tomato | cytosol | 17.26 | 22.66 |
| VIT_14s0030g00570.t01 | Wine grape | cytosol | 86.31 | 21.74 |
| VIT_17s0000g00210.t01 | Wine grape | cytosol | 68.45 | 19.97 |
| CDY22660 | Canola | cytosol | 68.45 | 19.79 |
| Bra031645.1-P | Field mustard | cytosol | 68.45 | 19.73 |
| CDY06335 | Canola | cytosol | 68.45 | 19.73 |
| AT1G08860.1 | Thale cress | cytosol | 68.45 | 19.69 |
| KXG21864 | Sorghum | cytosol | 67.86 | 19.49 |
| KRH68625 | Soybean | cytosol | 68.45 | 19.46 |
| KRG96891 | Soybean | cytosol | 67.26 | 19.02 |
| HORVU6Hr1G010680.1 | Barley | cytosol | 66.67 | 18.86 |
| KRH68626 | Soybean | cytosol | 64.88 | 18.79 |
| Os05t0373300-01 | Rice | plasma membrane | 66.67 | 18.79 |
| GSMUA_Achr5P08050_001 | Banana | cytosol | 66.07 | 18.69 |
| TraesCS6B01G074300.2 | Wheat | cytosol | 65.48 | 18.64 |
| TraesCS1D01G236200.1 | Wheat | cytosol | 65.48 | 18.64 |
| TraesCS1B01G247700.2 | Wheat | cytosol | 65.48 | 18.64 |
| TraesCS1A01G236100.4 | Wheat | cytosol | 65.48 | 18.64 |
| Zm00001d037872_P001 | Maize | plasma membrane | 64.88 | 18.51 |
| TraesCS6D01G057900.2 | Wheat | cytosol | 64.29 | 18.31 |
| TraesCS6A01G058200.2 | Wheat | cytosol, plastid | 66.07 | 17.54 |
| HORVU1Hr1G058000.10 | Barley | cytosol | 64.88 | 16.49 |
| TraesCS7A01G414000.1 | Wheat | cytosol | 48.81 | 13.95 |
| VIT_04s0044g01620.t01 | Wine grape | cytosol | 28.57 | 13.08 |
| VIT_19s0085g01000.t01 | Wine grape | extracellular | 28.57 | 12.47 |
| VIT_01s0137g00460.t01 | Wine grape | nucleus | 31.55 | 11.99 |
| VIT_00s0780g00040.t01 | Wine grape | cytosol, mitochondrion, nucleus | 30.36 | 11.67 |
| VIT_17s0000g09640.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 29.76 | 11.55 |
| VIT_14s0066g00290.t01 | Wine grape | mitochondrion | 30.95 | 11.28 |
Protein Annotations
| MapMan:27.2.7 | InterPro:BONZAI | ProteinID:CCB44874 | ProteinID:CCB44874.1 | InterPro:Copine | UniProt:F6GY38 |
| EMBL:FN594968 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005544 | GO:GO:0008150 | GO:GO:0008219 |
| GO:GO:0008289 | GO:GO:0009987 | GO:GO:0060548 | InterPro:IPR036465 | PFAM:PF07002 | PANTHER:PTHR10857 |
| PANTHER:PTHR10857:SF108 | SUPFAM:SSF53300 | UniParc:UPI0002108387 | ArrayExpress:VIT_18s0072g00560 | EnsemblPlantsGene:VIT_18s0072g00560 | EnsemblPlants:VIT_18s0072g00560.t01 |
| InterPro:vWFA_dom_sf | : | : | : | : | : |
Description
No Description!
Coordinates
chr18:+:19750082..19751424
Molecular Weight (calculated)
18365.0 Da
IEP (calculated)
4.793
GRAVY (calculated)
0.230
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAVDFTASN GNPRTPDSLH YIDPSSRFNA YQHAIMDVGE VIQFYDFDRC FPAWGFRGRI MDGTISHCFN MNGSASGVEV ERVQGIMATY ASALNHVALT
101: GLTLFGQVIN NVVEIAGQSL YYNSCKYFVL LIITDGVLTD LQDTKDALVR ASDLPLSILI VGMGGAHF
101: GLTLFGQVIN NVVEIAGQSL YYNSCKYFVL LIITDGVLTD LQDTKDALVR ASDLPLSILI VGMGGAHF
001: MGGCLSGDVK GGKQAIGGVQ QRPTSSTIAN NAAHNDAVDF FFRSRGQYPL FSQIELTLSA SNLLDCDITS KSDPMAVMYL RKKDGRLEEI GRTEVILNNL
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI
Arabidopsis Description
BON3Protein BONZAI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XQC7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.