Factsheet for VIT_14s0030g00570.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_15s0048g02070.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G08860.1	VIT_15s0048g02070.t01	AT2G45760.1	17631528

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0030g00550.t01	Wine grape	cytosol	70.16	97.91
VIT_12s0121g00080.t01	Wine grape	cytosol	87.26	97.82
VIT_14s0030g00600.t01	Wine grape	cytosol	75.86	97.31
VIT_14s0030g00540.t01	Wine grape	cytosol	65.37	95.2
VIT_14s0030g00500.t01	Wine grape	cytosol	84.56	94.95
VIT_18s0001g15760.t01	Wine grape	cytosol, extracellular	12.44	86.46
VIT_18s0072g00560.t01	Wine grape	peroxisome	21.74	86.31
KRH68626	Soybean	cytosol	62.37	71.72
Solyc10g045500.1.1	Tomato	cytosol	13.64	71.09
AT1G08860.1	Thale cress	cytosol	61.92	70.72
KRH68625	Soybean	cytosol	62.37	70.39
KRG96891	Soybean	cytosol	62.22	69.87
CDY06335	Canola	cytosol	60.72	69.47
Bra031645.1-P	Field mustard	cytosol	60.57	69.3
CDY22660	Canola	cytosol	60.27	69.19
GSMUA_Achr5P08050_001	Banana	cytosol	60.42	67.85
VIT_17s0000g00210.t01	Wine grape	cytosol	56.37	65.28
KXG21864	Sorghum	cytosol	56.97	64.96
TraesCS1B01G247700.2	Wheat	cytosol	57.27	64.75
TraesCS1D01G236200.1	Wheat	cytosol	57.27	64.75
TraesCS1A01G236100.4	Wheat	cytosol	57.12	64.58
Zm00001d037872_P001	Maize	plasma membrane	56.37	63.84
Os05t0373300-01	Rice	plasma membrane	56.82	63.59
TraesCS6B01G074300.2	Wheat	cytosol	56.22	63.56
TraesCS6D01G057900.2	Wheat	cytosol	55.92	63.22
HORVU6Hr1G010680.1	Barley	cytosol	55.02	61.78
TraesCS6A01G058200.2	Wheat	cytosol, plastid	56.22	59.24
HORVU1Hr1G058000.10	Barley	cytosol	57.12	57.64
TraesCS7A01G414000.1	Wheat	cytosol	41.53	47.11
VIT_01s0137g00460.t01	Wine grape	nucleus	14.99	22.62
VIT_17s0000g09640.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	13.94	21.48
VIT_00s0780g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	13.94	21.28
VIT_04s0044g01620.t01	Wine grape	cytosol	11.39	20.71
VIT_14s0066g00290.t01	Wine grape	mitochondrion	14.09	20.39
VIT_19s0085g01000.t01	Wine grape	extracellular	11.24	19.48

Protein Annotations

Gene3D:2.60.40.150	MapMan:27.2.7	Gene3D:3.40.50.410	InterPro:BONZAI	InterPro:C2B_Copine	InterPro:C2_dom
InterPro:C2_domain_sf	ProteinID:CCB58152	ProteinID:CCB58152.1	InterPro:Copine	UniProt:F6HTZ1	EMBL:FN596249
GO:GO:0003674	GO:GO:0005488	GO:GO:0005544	GO:GO:0005575	GO:GO:0008150	GO:GO:0008219
GO:GO:0008289	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0060548	InterPro:IPR000008
InterPro:IPR002035	InterPro:IPR035892	InterPro:IPR036465	PFAM:PF00168	PFAM:PF07002	PFscan:PS50004
PFscan:PS50234	PANTHER:PTHR10857	PANTHER:PTHR10857:SF108	SMART:SM00239	SMART:SM00327	SUPFAM:SSF49562
SUPFAM:SSF53300	UniParc:UPI000210A181	ArrayExpress:VIT_14s0030g00570	EnsemblPlantsGene:VIT_14s0030g00570	EnsemblPlants:VIT_14s0030g00570.t01	InterPro:VWF_A
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

No Description!

Coordinates

chr14:-:4637973..4647999

Molecular Weight (calculated)

74321.4 Da

IEP (calculated)

7.437

GRAVY (calculated)

-0.118

Length

667 amino acids

Sequence
(BLAST)

001: MGGCFSDVRG GKQAVGVGLT GPSLPPMPTS DVAHNDAVDH FFRARGIQPL FTQLELSLSG SNLRDRDIIS KACIFTCYIL HEEEIYRKRS GLYKNFLSKK
101: NKIPINKKHY FKKQAFWLKI HSENLLVMLW FKLKKFLFPL VLQSDPMVVA YTKKRDGTLE ELGRTEVIMN SLDPAWIEKI TVAYHFEIVQ PLIFHVYDVD
201: TKYYNLPVKT LKLNDQEFLG EGSCVLSEIV TKQGQSLTLD LHNRNGNRGL KNLGKLTVHA EETVASRNAI EVIFHCSHLD NKDLFSKSDP FLRISRIVEN
301: GGSVPICKTE VVDNNLNPIW RPLCLTMQQF VSKDNPLVIE CFDFNTSGNH VLIGKLQKSV ADLEKLHKQK TGASFILPAS AQHGHEKVLK GQLFVDQFCE
401: KQLYSFIDYV SSGFEFNFMV AVDFTASNGN PRTPDSLHYI DPSGRFNAYQ QAIMEVGEVI QFYDSDRRFP AWGFGGRTID GTVSHCFNLN GSARGVEVEG
501: VQGIMAAYAS ALNHVALAGP TLFGQVINNA AEIASQSLSY NSRKYFVLLI ITDGVLTDLQ ETKDALVRAS DLPLSILIVG VGGADFKQME ILDADNGCRL
601: ESSTGRVATR DIVQFVPMRE VRAGGQTSVV QALLEELPGQ FLTYMRSRDI KPGAVNIAQT STSHATI

Best Arabidopsis Sequence Match ( AT1G08860.1 )
(BLAST)

001: MGGCLSGDVK GGKQAIGGVQ QRPTSSTIAN NAAHNDAVDF FFRSRGQYPL FSQIELTLSA SNLLDCDITS KSDPMAVMYL RKKDGRLEEI GRTEVILNNL
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI

Arabidopsis Description

BON3Protein BONZAI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XQC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.