Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_15s0048g02070.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G08860.1 | VIT_15s0048g02070.t01 | AT2G45760.1 | 17631528 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0072g00560.t01 | Wine grape | peroxisome | 70.83 | 40.48 |
| Solyc10g045500.1.1 | Tomato | cytosol | 36.46 | 27.34 |
| VIT_14s0030g00550.t01 | Wine grape | cytosol | 87.5 | 17.57 |
| VIT_14s0030g00540.t01 | Wine grape | cytosol | 83.33 | 17.47 |
| VIT_14s0030g00600.t01 | Wine grape | cytosol | 84.38 | 15.58 |
| VIT_14s0030g00500.t01 | Wine grape | cytosol | 87.5 | 14.14 |
| VIT_12s0121g00080.t01 | Wine grape | cytosol | 85.42 | 13.78 |
| VIT_14s0030g00570.t01 | Wine grape | cytosol | 86.46 | 12.44 |
| KXG21864 | Sorghum | cytosol | 72.92 | 11.97 |
| Zm00001d037872_P001 | Maize | plasma membrane | 71.88 | 11.71 |
| Os05t0373300-01 | Rice | plasma membrane | 70.83 | 11.41 |
| KRH68626 | Soybean | cytosol | 68.75 | 11.38 |
| GSMUA_Achr5P08050_001 | Banana | cytosol | 69.79 | 11.28 |
| KRH68625 | Soybean | cytosol | 68.75 | 11.17 |
| VIT_17s0000g00210.t01 | Wine grape | cytosol | 66.67 | 11.11 |
| TraesCS1A01G236100.4 | Wheat | cytosol | 66.67 | 10.85 |
| TraesCS1B01G247700.2 | Wheat | cytosol | 66.67 | 10.85 |
| TraesCS1D01G236200.1 | Wheat | cytosol | 66.67 | 10.85 |
| CDY22660 | Canola | cytosol | 65.62 | 10.84 |
| AT1G08860.1 | Thale cress | cytosol | 65.62 | 10.79 |
| KRG96891 | Soybean | cytosol | 66.67 | 10.77 |
| HORVU6Hr1G010680.1 | Barley | cytosol | 66.67 | 10.77 |
| Bra031645.1-P | Field mustard | cytosol | 64.58 | 10.63 |
| CDY06335 | Canola | cytosol | 64.58 | 10.63 |
| TraesCS6D01G057900.2 | Wheat | cytosol | 64.58 | 10.51 |
| TraesCS6B01G074300.2 | Wheat | cytosol | 64.58 | 10.51 |
| HORVU1Hr1G058000.10 | Barley | cytosol | 67.71 | 9.83 |
| TraesCS6A01G058200.2 | Wheat | cytosol, plastid | 64.58 | 9.79 |
| TraesCS7A01G414000.1 | Wheat | cytosol | 54.17 | 8.84 |
| VIT_04s0044g01620.t01 | Wine grape | cytosol | 32.29 | 8.45 |
| VIT_19s0085g01000.t01 | Wine grape | extracellular | 30.21 | 7.53 |
| VIT_01s0137g00460.t01 | Wine grape | nucleus | 34.38 | 7.47 |
| VIT_17s0000g09640.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 33.33 | 7.39 |
| VIT_00s0780g00040.t01 | Wine grape | cytosol, mitochondrion, nucleus | 33.33 | 7.32 |
| VIT_14s0066g00290.t01 | Wine grape | mitochondrion | 33.33 | 6.94 |
Protein Annotations
| MapMan:35.1 | InterPro:BONZAI | ProteinID:CCB46113 | ProteinID:CCB46113.1 | InterPro:Copine | UniProt:F6GZV6 |
| EMBL:FN595227 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005544 | GO:GO:0008150 | GO:GO:0008219 |
| GO:GO:0008289 | GO:GO:0009987 | GO:GO:0060548 | InterPro:IPR036465 | PFAM:PF07002 | PANTHER:PTHR10857 |
| PANTHER:PTHR10857:SF108 | SUPFAM:SSF53300 | UniParc:UPI000210AC97 | ArrayExpress:VIT_18s0001g15760 | EnsemblPlantsGene:VIT_18s0001g15760 | EnsemblPlants:VIT_18s0001g15760.t01 |
| InterPro:vWFA_dom_sf | : | : | : | : | : |
Description
No Description!
Coordinates
chr18:-:13920267..13920719
Molecular Weight (calculated)
10467.8 Da
IEP (calculated)
4.890
GRAVY (calculated)
0.468
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MAAYASALNH VALAGPTLFG QVINNVVEIV GQSLCYNNYK YFVLLIIKDG VLTDLQETKY ALVRASDFPL SILIVGVGRA DFKKMEILDA DNGCQL
001: MGNCCSDVAS GAGATAGVGG SGSSAALGAT NDALDYYLKS KGFNGLFSQI ELSFSASNLR DRDVLSKSDP MVVVYQKEKD ATLSEVFRSE VVLNSLAPKW
101: IKKFIVAYHF ETVQTLVFRV YDVDTKFQNS REEMLKLDEQ QFLGEATCAL SEIITKSTRT STLELKRKDG FAPQAQPHHG KLIIHAEESL ASKISTEIVF
201: RCSNLESKDL FSKSDPFLVV SKIVEHGTPI PVSKTEVRKN DLNPIWKPVF LSVQQVGSKD SPVIIECSDF NSNGKHSLIG KVQKSLSDLE KLHLAGQGIN
301: FSLPTGAGQN KVLKSQLFVD KFTETVHHTF LEYLASGFEL NFMVAIDFTA SNGNPRLPDS LHYIDPSGRL NAYQRAIMDV GEVLQFYDSD KRFPAWGFGA
401: RPIDAPVSHC FNLNGSSSYS EVDGIQGIMT SYTSALFNVS LAGPTLFGPV INAAAMIASA SLAQGSRKYY VLLIITDGVI TDLQETKDAL VSASDLPLSI
501: LIVGVGGADF KEMEILDADK GERLESSSGR LASRDIVQFV ALRDVQYGEI SVVQALLAEL PSQFLTYMRI RNMKPIPP
101: IKKFIVAYHF ETVQTLVFRV YDVDTKFQNS REEMLKLDEQ QFLGEATCAL SEIITKSTRT STLELKRKDG FAPQAQPHHG KLIIHAEESL ASKISTEIVF
201: RCSNLESKDL FSKSDPFLVV SKIVEHGTPI PVSKTEVRKN DLNPIWKPVF LSVQQVGSKD SPVIIECSDF NSNGKHSLIG KVQKSLSDLE KLHLAGQGIN
301: FSLPTGAGQN KVLKSQLFVD KFTETVHHTF LEYLASGFEL NFMVAIDFTA SNGNPRLPDS LHYIDPSGRL NAYQRAIMDV GEVLQFYDSD KRFPAWGFGA
401: RPIDAPVSHC FNLNGSSSYS EVDGIQGIMT SYTSALFNVS LAGPTLFGPV INAAAMIASA SLAQGSRKYY VLLIITDGVI TDLQETKDAL VSASDLPLSI
501: LIVGVGGADF KEMEILDADK GERLESSSGR LASRDIVQFV ALRDVQYGEI SVVQALLAEL PSQFLTYMRI RNMKPIPP
Arabidopsis Description
BON1Protein BONZAI 1 [Source:UniProtKB/Swiss-Prot;Acc:Q941L3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.