Factsheet for TraesCS6A01G058200.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G074300.2	Wheat	cytosol	90.84	97.46
TraesCS6D01G057900.2	Wheat	cytosol	90.52	97.12
TraesCS1A01G236100.4	Wheat	cytosol	85.78	92.03
HORVU6Hr1G010680.1	Barley	cytosol	85.47	91.08
Os05t0373300-01	Rice	plasma membrane	74.57	79.19
KXG21864	Sorghum	cytosol	72.99	78.97
Zm00001d037872_P001	Maize	plasma membrane	71.72	77.08
GSMUA_Achr5P08050_001	Banana	cytosol	63.98	68.18
VIT_18s0072g00560.t01	Wine grape	peroxisome	17.54	66.07
VIT_14s0030g00550.t01	Wine grape	cytosol	48.97	64.85
VIT_14s0030g00540.t01	Wine grape	cytosol	46.76	64.63
VIT_18s0001g15760.t01	Wine grape	cytosol, extracellular	9.79	64.58
VIT_14s0030g00600.t01	Wine grape	cytosol	52.61	64.04
Solyc10g045500.1.1	Tomato	cytosol	12.8	63.28
VIT_14s0030g00500.t01	Wine grape	cytosol	59.08	62.96
VIT_12s0121g00080.t01	Wine grape	cytosol	58.61	62.35
CDY22660	Canola	cytosol	56.71	61.79
CDY06335	Canola	cytosol	56.4	61.23
Bra031645.1-P	Field mustard	cytosol	56.08	60.89
AT1G08860.1	Thale cress	cytosol	56.08	60.79
KRH68626	Soybean	cytosol	55.61	60.69
KRG96891	Soybean	cytosol	56.24	59.93
KRH68625	Soybean	cytosol	55.77	59.73
VIT_14s0030g00570.t01	Wine grape	cytosol	59.24	56.22
TraesCS7A01G414000.1	Wheat	cytosol	51.66	55.61
TraesCS6A01G189800.1	Wheat	cytosol	47.24	52.09
TraesCS5A01G368900.1	Wheat	endoplasmic reticulum, extracellular	11.85	23.73
TraesCS7A01G308900.1	Wheat	mitochondrion	14.53	22.94
TraesCS3A01G414400.2	Wheat	cytosol	15.64	22.71
TraesCS7A01G381200.1	Wheat	cytosol, plastid	15.01	21.54
TraesCS3A01G503400.1	Wheat	cytosol	12.95	21.47
TraesCS7A01G381300.1	Wheat	plastid	14.85	20.57
TraesCS5A01G103800.2	Wheat	endoplasmic reticulum, extracellular, golgi	15.17	17.17
TraesCS3A01G503300.1	Wheat	cytosol	12.8	16.95

Protein Annotations

Gene3D:2.60.40.150	MapMan:27.2.7	Gene3D:3.40.50.410	InterPro:BONZAI	InterPro:C2B_Copine	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:Copine	GO:GO:0003674	GO:GO:0005488	GO:GO:0005544	GO:GO:0008150
GO:GO:0008219	GO:GO:0008289	GO:GO:0009987	GO:GO:0060548	InterPro:IPR000008	InterPro:IPR002035
InterPro:IPR035892	InterPro:IPR036465	PFAM:PF00168	PFAM:PF07002	PFscan:PS50004	PFscan:PS50234
PANTHER:PTHR10857	PANTHER:PTHR10857:SF108	SMART:SM00239	SMART:SM00327	SUPFAM:SSF49562	SUPFAM:SSF53300
EnsemblPlantsGene:TraesCS6A01G058200	EnsemblPlants:TraesCS6A01G058200.2	InterPro:VWF_A	TIGR:cd01459	TIGR:cd04047	TIGR:cd04048
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:30722437..30728710

Molecular Weight (calculated)

69252.6 Da

IEP (calculated)

6.071

GRAVY (calculated)

-0.173

Length

633 amino acids

Sequence
(BLAST)

001: MSCCLAEAPA SRGFLPLNSL SLSLSASKLV FKPEGRRLAP ESGSGMGGCF SGDVRGGTEA IGGGASGAAA GQGQGGPNEA LDHFLQGHGL RGLYTPLELS
101: FSASKLRDMD ALSKSDPMLV VYTKMDGRLE EIGRTEVILN SLKPLWITKT MINYQFEIVQ PLVFRIYDID TKYHNTPVKM LNLAQQDFLG EAFCNLSEIV
201: TKFNHSLTLN LRNGSGHALQ GTMIVHAEET ASSRMAVEMT FHCLNLDNKD TFSKSDPFLR VSRLSESAVA IPICKTEVIN NNLNPVWRPI TLTSQQYSSR
301: DDPLLVECFD FDASGDHELM GALQTTIAQL ENLYKSKAGA NFYSRKGQKK LKGQLFLDTF QEKVQHTFLD YISSGFELNF MVAVDFTASN GDPRTPQSLH
401: YIDPSGRLNS YQQAILGVSE VLQFYDKDRR FPAWGFGART PQGSVSHCFN LNASTNDCEV VGFEGIMSAY SSTLYSVSLS GPTLFGPVIN KAAEIASHSA
501: QYGNNRYFVL LIITDGVITD EQETKDSIVR ASDLPLSILI VGVGGADFTQ MRTLDADLGK RLQSSTGRVA TRDIVQFVPM REVQAGGQVT VVQSLLEELP
601: GQFLEYMRTR GIMPRPPQHA SAPPAYPPPP PQL

Best Arabidopsis Sequence Match ( AT5G07300.1 )
(BLAST)

001: MGSCWSDGSY AGGGMVGVGG GANSSAATPN DAVDYYLKSR GYNGLFSQIE LSFSASNLRD RDVISKSDAM VVVYTKGRDG TLAELFRSEV VLNSLNPKWI
101: KNFTIGYQFE IVQTLLFRVY DIDTQFQNSK EELLKLDEQQ FLGEATCTLS EVVTKSNRTI ALELMRKEGV AAQTQPQHNG KLIVHAEESL ASKTNTEIVF
201: RGLNLESKDT FSKSDPFLVI SKIVEHGTPI PVSKTEVLKN DPNPLWKPVS LSVQQVGSKD SPLVIECLDF NGNGNHDLIG KVQKSLSDLE KLHLAGQGIN
301: LALPTGVGHK HEDRVLKSQL FVDKFTETVQ HTFLEYLASG FELNFMVAID FTASNGNPRL PDSLHYIDPT GRLNAYQRAI VEVGEVLQFY DSDKRFPAWG
401: FGARPIDIPV SHCFNLNGSS TYCEVDGIQG IMNAYNGALF NVSFAGPTLF GPVINAAATI ASDSLAQSAK KYYVLLIITD GVITDLQETR DSIVSASDLP
501: LSILIVGVGG ADYKEMEVLD GDKGEKLESS SGRIASRDIV QFVALRDIQY GEVSVVEALL AELPTQFLTY MRNRNITPTT TTPSST

Arabidopsis Description

BON2Protein BONZAI 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5S1W2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.