Factsheet for TraesCS7A01G381300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G377600.1	Wheat	plastid	99.12	99.12
TraesCS7B01G283200.1	Wheat	cytosol	98.47	98.68
TraesCS7A01G381200.1	Wheat	cytosol, plastid	85.56	88.66
Os06t0608800-02	Rice	nucleus	85.78	87.7
KXG20338	Sorghum	nucleus	83.37	85.23
Zm00001d046554_P003	Maize	cytosol, plastid	81.84	84.04
GSMUA_Achr2P05470_001	Banana	nucleus	65.65	80.21
Zm00001d036831_P006	Maize	cytosol	78.34	78.17
KRH07106	Soybean	cytosol, plastid	39.61	62.2
VIT_00s0780g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	57.77	60.41
TraesCS7A01G308900.1	Wheat	mitochondrion	49.45	56.36
TraesCS3A01G503400.1	Wheat	cytosol	46.61	55.76
TraesCS3A01G414400.2	Wheat	cytosol	53.17	55.73
KRH07102	Soybean	cytosol	16.19	52.86
TraesCS5A01G368900.1	Wheat	endoplasmic reticulum, extracellular	35.01	50.63
CDY49067	Canola	extracellular	16.41	50.0
TraesCS5A01G103800.2	Wheat	endoplasmic reticulum, extracellular, golgi	55.58	45.44
Bra012681.1-P	Field mustard	cytosol	10.5	42.86
TraesCS3A01G503300.1	Wheat	cytosol	40.92	39.12
Bra018339.1-P	Field mustard	cytosol	12.47	38.51
CDY03984	Canola	cytosol	17.07	26.26
TraesCS6A01G189800.1	Wheat	cytosol	20.57	16.38
TraesCS1A01G236100.4	Wheat	cytosol	20.57	15.93
TraesCS6A01G058200.2	Wheat	cytosol, plastid	20.57	14.85
TraesCS7A01G414000.1	Wheat	cytosol	17.72	13.78

Protein Annotations

MapMan:19.2.2.1.5.3.2	MapMan:19.2.2.1.6.2	Gene3D:3.30.40.10	InterPro:Copine	InterPro:IPR001841	InterPro:IPR002035
InterPro:IPR013083	InterPro:IPR036465	PFAM:PF07002	PFAM:PF13920	PFscan:PS50089	PANTHER:PTHR10857
PANTHER:PTHR10857:SF28	SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS7A01G381300
EnsemblPlants:TraesCS7A01G381300.1	InterPro:VWF_A	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	TIGR:cd16729	SEG:seg
InterPro:vWFA_dom_sf	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:556170579..556175576

Molecular Weight (calculated)

50509.8 Da

IEP (calculated)

6.113

GRAVY (calculated)

-0.543

Length

457 amino acids

Sequence
(BLAST)

001: MGQKDSKPSY NSGNSSNGYN SRYANTPSSY SPRYASSAGN NVQQPEAQAR LQRKYSRIGD DYRSVSQVTE ALAQAGLESS NLIVGIDFTK SNEWTGKISY
101: NRRCLHDIGN TPNPYEQAIS IIGRTLSAFD EDNLIPCFGF GDASTHDQEV FSFYPENQPC NGFEEALERY REIVPTLRLA GPTSFAPIIE TAIGIADSTG
201: GQYHVLLIIA DGQVTRSVDT QSGQLSPQER DTIDAIVKAS HFPLSIVLVG VGDGPWDMMH KFDDNIPARS FDNFQFVNFT EIMSKSIAAD RKEAEFALSA
301: LMEIPTQYKA TLDLQLLGRR QGIPPRVPLP PPTRTPYSRS TSFDQQSGVY SRSSSFGQQT SGFQQSDNFK QRQHGATRRP DSYSSESSQP AASRIPDTYA
401: SESSESTLII PLSCAICMDK SKDLAFGCGH QTCYDCGKNL VRCPMCQQHI TTRIRLY

Best Arabidopsis Sequence Match ( AT1G67800.4 )
(BLAST)

001: MGGSSSKESP RGGGSGRRYE RSVSGSSSYS SAWDQSSYYQ TPNHPSASPV SSYNSGRQTP KNLERKYSRI ADNYRSIDEV TAALSHAGLE SSNLIVGIDV
101: TKSNEWTGAR SFGRKSLHFI GTTPNPYQQA ISIIGKTLSV FDEDNLIPCY GFGDATTHDQ DVFSFNPNDT YCNGFEEVLM CYREIVPQLR LSGPTSFAPI
201: IERAMTIVEE SGGQYHVLLI IADGQVTRSV DTDNGGFSPQ EQQTIDAIVR ASEYPLSIVL VGVGDGPWDT MRQFDDNIPA RAFDNFQFVN FTDIMSKNID
301: PARKEAEFAL SALMEIPSQY KATLELGLLG QRTGHCPDRI ALPPPTYATQ SMRNSPRTSR STSFQNKPYD NGVSSTPPST THNESQQQFC PVCLVSAKNM
401: AFNCGHQTCA GCGEDLHVCP ICRSSISVRI KLY

Arabidopsis Description

Copine (Calcium-dependent phospholipid-binding protein) family [Source:UniProtKB/TrEMBL;Acc:F4HTR6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.