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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P09310_001 Banana endoplasmic reticulum, golgi 69.79 70.73
GSMUA_Achr9P12830_001 Banana cytosol, mitochondrion, nucleus, plastid 74.33 67.97
Os06t0608800-02 Rice nucleus 80.75 67.56
Zm00001d046554_P003 Maize cytosol, plastid 79.68 66.97
KXG20338 Sorghum nucleus 79.95 66.89
TraesCS7B01G283200.1 Wheat cytosol 80.48 66.01
TraesCS7D01G377600.1 Wheat plastid 80.21 65.65
TraesCS7A01G381300.1 Wheat plastid 80.21 65.65
TraesCS7A01G381200.1 Wheat cytosol, plastid 75.4 63.95
TraesCS7D01G377500.1 Wheat plastid 76.47 63.0
GSMUA_Achr7P20180_001 Banana cytosol, nucleus, plastid 29.95 62.57
TraesCS7B01G283100.1 Wheat cytosol 73.8 62.3
Zm00001d036831_P006 Maize cytosol 75.13 61.35
GSMUA_Achr8P01300_001 Banana nucleus 66.31 57.14
GSMUA_Achr7P03440_001 Banana cytosol 47.59 56.87
GSMUA_Achr9P29460_001 Banana nucleus 69.25 55.34
GSMUA_Achr10P... Banana nucleus 56.42 55.24
GSMUA_Achr6P06710_001 Banana nucleus 65.78 53.48
GSMUA_AchrUn_... Banana mitochondrion 58.82 52.88
GSMUA_Achr5P25930_001 Banana extracellular 31.28 49.37
GSMUA_Achr5P25940_001 Banana cytosol 27.81 47.93
GSMUA_AchrUn_... Banana cytosol 12.03 24.19
GSMUA_AchrUn_... Banana cytosol, golgi, plastid 22.19 18.95
GSMUA_Achr5P08050_001 Banana cytosol 23.26 14.65
Protein Annotations
MapMan:19.2.2.1.5.3.2MapMan:19.2.2.1.6.2Gene3D:3.30.40.10ncoils:CoilInterPro:CopineEnsemblPlantsGene:GSMUA_Achr2G05470_001
EnsemblPlants:GSMUA_Achr2P05470_001EnsemblPlants:GSMUA_Achr2T05470_001InterPro:IPR001841InterPro:IPR002035InterPro:IPR013083InterPro:IPR036465
UniProt:M0S5D8PFAM:PF07002PFAM:PF13920PFscan:PS50089PANTHER:PTHR10857PANTHER:PTHR10857:SF28
SMART:SM00184SMART:SM00327SUPFAM:SSF53300SUPFAM:SSF57850UniParc:UPI0002957457InterPro:VWF_A
InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDInterPro:vWFA_dom_sf:::
Description
E3 ubiquitin-protein ligase RGLG2 [Source:GMGC_GENE;Acc:GSMUA_Achr2G05470_001]
Coordinates
chr2:-:10549861..10556284
Molecular Weight (calculated)
41792.4 Da
IEP (calculated)
5.287
GRAVY (calculated)
-0.363
Length
374 amino acids
Sequence
(BLAST)
001: MGGGGSKHRL NRLQRKYSRI NDDYQTLNQV TEALAEAGLE SSNLIVGIDF TKSNEWTGKV SFNRRCLHDI GNTPNPYEQA ISIIGRTLST FDEDNLIPCF
101: GFGDASTHDQ EVFSFYPENQ PCNGFEEALG RYKELIPNVR LAGPTSFAPI IETAIGIVDN TGGQYHVLLI IADGQVTRSV DTQYGQLSPQ ERDTINAIVK
201: ASDYPLSIVL VGVGDGPWEM MREFDDNIPS RAFDNFQFVN FTEIMSRNIP ASRKETEFAL AALMEIPSQY KATIDLQLLG RRRGVTERVC LPPPSRNHYS
301: RSTSFEQGPG ITRSAQSVSY ESSVIEEKLI CPICLWKSKD LAFGCGHQTC YECGKELQRC PICQANISTR IRLY
Best Arabidopsis Sequence Match ( AT5G14420.1 )
(BLAST)
001: MGTGNSKENW RQSSFRSTSA SSASPSSSSW ASQQSYPQYG AESYNYPPPP SYAQPPEYTQ PPPPLYSTQP YSAPSYSAPP SQSYGSDNKK RLERKYSKIS
101: DDYSSLEQVT EALARAGLES SNLIVGIDFT KSNEWTGARS FNRKSLHFIG SSPNPYEQAI TIIGRTLAAF DEDNLIPCYG FGDASTHDQD VFSFNSEDRF
201: CNGFEEVLSR YKEIVPQLKL AGPTSFAPII DMAMTIVEQS GGQYHVLVII ADGQVTRSVD TENGQLSPQE QKTVDAIVQA SKLPLSIVLV GVGDGPWDMM
301: REFDDNIPAR AFDNFQFVNF TEIMAKNKAQ SLKETEFALS ALMEIPQQYK ATIELNLLGR RNGYIPERFP LPPPMRGGSS SYNSPKPSRL PSFKPSVPPH
401: PTEGYHVRSS PVPPPTSSAS DNQLCPICLS NPKDMAFGCG HQTCCECGPD LQMCPICRAP IQTRIKLY
Arabidopsis Description
RGLG2E3 ubiquitin-protein ligase RGLG2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY87]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.