CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH20017
KRH41052
KRH54085
KRH63871

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45760.1	KRH20017	AT5G07300.1	17631528
AT2G45760.1	KRH41052	AT5G07300.1	17631528
AT2G45760.1	KRH54085	AT5G07300.1	17631528
AT2G45760.1	KRH63871	AT5G07300.1	17631528

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65137	Soybean	cytosol	52.63	62.83
KRH48230	Soybean	cytosol	51.32	61.58
KRH48231	Soybean	cytosol	51.32	61.58
KRH48233	Soybean	cytosol	35.96	45.81
KRH00634	Soybean	cytosol	30.7	45.16
KRH65139	Soybean	cytosol	35.09	43.48
KRH65136	Soybean	cytosol	32.46	42.53
KRH65138	Soybean	cytosol	30.26	41.57
KRH48229	Soybean	cytosol	28.07	39.26
KRH65134	Soybean	cytosol	27.19	33.51
KRH48232	Soybean	cytosol	23.25	32.52
KRH65133	Soybean	cytosol	23.68	30.0
Solyc01g091590.2.1	Tomato	cytosol	24.56	29.47
VIT_15s0048g02070.t01	Wine grape	cytosol	22.37	28.98
KRH77255	Soybean	cytosol	21.93	28.57
KRH48228	Soybean	cytosol	22.37	28.49
KRH28237	Soybean	cytosol	21.93	28.41
KRH00635	Soybean	cytosol	22.37	28.33
PGSC0003DMT400071403	Potato	cytosol	17.54	27.97
Bra014450.1-P	Field mustard	cytosol	16.23	21.89
CDY42491	Canola	cytosol	16.67	20.99
CDX89102	Canola	cytosol	16.67	20.65
CDY53895	Canola	cytosol	17.11	19.31
Bra000402.1-P	Field mustard	cytosol	17.11	19.31
AT3G61190.2	Thale cress	cytosol	15.35	18.23
CDX95663	Canola	cytosol	16.23	18.23
Bra007581.1-P	Field mustard	cytosol	14.91	18.18
CDY27361	Canola	cytosol	15.79	17.91
Bra004936.1-P	Field mustard	cytosol	15.79	17.91
CDX74764	Canola	cytosol	15.35	17.41
CDY18902	Canola	cytosol	15.35	17.41
AT2G45760.1	Thale cress	cytosol	15.79	17.39
CDX71760	Canola	cytosol, mitochondrion	15.79	17.06
CDY69632	Canola	cytosol, mitochondrion	15.35	16.59
Bra039316.1-P	Field mustard	cytosol	14.91	16.59
CDY37063	Canola	cytosol	14.91	16.59

Protein Annotations

EMBL:ACUP02001314	EnsemblPlants:KRH65135	EnsemblPlantsGene:GLYMA_03G016000	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF20	PFAM:PF00168	ProteinID:KRH65135
ProteinID:KRH65135.1	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI000295255F	UniProt:K7KC78	MapMan:27.2.8

Description

hypothetical protein

Coordinates

chr3:+:1579816..1580818

Molecular Weight (calculated)

26294.9 Da

IEP (calculated)

9.462

GRAVY (calculated)

-0.167

Length

228 amino acids

Sequence
(BLAST)

001: MQTFRGTKRV RLYTLLNTHH TFFALYLRTT YYKVVSRYLL WYTKILIDME AKPQARTLEI TVMSGENICV DRSSGAENVY VVVRAESLNS CTTKTVNEDK
101: GVHAWNEKLL LDIPTHARSV TFEVQCKKYK GVRPIGVARI ALSDFLSNDT KIVSESVPQM YCYGLRNWEG RQNGVIHFSV KVVSLAGDKY LCSETKQEKD
201: IIGIEHSSLV ELPKCSCLKF FFPIFRWR

Best Arabidopsis Sequence Match ( AT2G45760.1 )
(BLAST)

001: MSYSTFKRSL EIEVISAEGL KVDRKPLKKK TYSVVRIDEK SWASKVDELG GSYPIWKDRF DMEMPINASV RFISIEVYYR TSGSGRDKNV GYAKIPVTDF
101: MGGFAPQGHL NFLSYRLRDE YGDKCGIVNV SIMVKPDGND HKSSLPSSSF AVAPVDYAAC SWQATAAARN NQMWRPRTSS SMVSTAGYGG GRVVTGVPVW
201: CAYQRPS

Arabidopsis Description

BAP2BON1-associated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.