CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH20017
KRH41052
KRH54085
KRH63871

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45760.1	KRH20017	AT5G07300.1	17631528
AT2G45760.1	KRH41052	AT5G07300.1	17631528
AT2G45760.1	KRH54085	AT5G07300.1	17631528
AT2G45760.1	KRH63871	AT5G07300.1	17631528

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28237	Soybean	cytosol	96.0	95.45
KRH48228	Soybean	cytosol	82.86	81.01
KRH65133	Soybean	cytosol	78.86	76.67
VIT_15s0048g02070.t01	Wine grape	cytosol	43.43	43.18
PGSC0003DMT400071403	Potato	cytosol	34.86	42.66
KRH00634	Soybean	cytosol	37.71	42.58
Solyc01g091590.2.1	Tomato	cytosol	44.0	40.53
KRH48229	Soybean	cytosol	37.14	39.88
KRH00635	Soybean	cytosol	38.86	37.78
KRH48233	Soybean	cytosol	38.29	37.43
KRH65136	Soybean	cytosol	37.14	37.36
CDY53895	Canola	cytosol	42.86	37.13
Bra000402.1-P	Field mustard	cytosol	42.86	37.13
CDX95663	Canola	cytosol	42.29	36.45
KRH65134	Soybean	cytosol	38.29	36.22
KRH65138	Soybean	cytosol	34.29	36.14
KRH65139	Soybean	cytosol	37.14	35.33
Bra014450.1-P	Field mustard	cytosol	33.71	34.91
CDY27361	Canola	cytosol	40.0	34.83
Bra007581.1-P	Field mustard	cytosol	37.14	34.76
Bra039316.1-P	Field mustard	cytosol	40.0	34.15
CDY37063	Canola	cytosol	40.0	34.15
AT2G45760.1	Thale cress	cytosol	40.0	33.82
Bra004936.1-P	Field mustard	cytosol	37.71	32.84
CDY18902	Canola	cytosol	37.71	32.84
CDY42491	Canola	cytosol	33.71	32.6
AT3G61190.2	Thale cress	cytosol	35.43	32.29
CDX89102	Canola	cytosol	33.71	32.07
CDX74764	Canola	cytosol	36.0	31.34
CDY69632	Canola	cytosol, mitochondrion	37.14	30.81
CDX71760	Canola	cytosol, mitochondrion	36.57	30.33
KRH48230	Soybean	cytosol	32.57	30.0
KRH48231	Soybean	cytosol	29.71	27.37
KRH65137	Soybean	cytosol	29.71	27.23
KRH48232	Soybean	cytosol	24.0	25.77
KRH65135	Soybean	mitochondrion	28.57	21.93

Protein Annotations

EMBL:ACUP02000668	EnsemblPlants:KRH77255	EnsemblPlantsGene:GLYMA_01G202200	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF20	PFAM:PF00168	ProteinID:KRH77255
ProteinID:KRH77255.1	SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI00023BE5BC	UniProt:I1J9N1
MapMan:27.2.8	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:53506305..53508343

Molecular Weight (calculated)

18869.5 Da

IEP (calculated)

9.164

GRAVY (calculated)

-0.116

Length

175 amino acids

Sequence
(BLAST)

001: MSRTVEMTIL SAENLQMNRK SIRGSTFVTV QSDTSSDTSA ATKVDSEGGS YPSWNEKVVM DVPLHARFIT VEVKCKTSSS GSNSVGVAQI PVSDFIGGYM
101: PENQLHFLSY RLWDGKVRRN GVINISVRVK VAEHSSCNLN SMSLSAVTGV PVAGNGPTGV VTGIPAVWLN YQRNL

Best Arabidopsis Sequence Match ( AT2G45760.1 )
(BLAST)

001: MSYSTFKRSL EIEVISAEGL KVDRKPLKKK TYSVVRIDEK SWASKVDELG GSYPIWKDRF DMEMPINASV RFISIEVYYR TSGSGRDKNV GYAKIPVTDF
101: MGGFAPQGHL NFLSYRLRDE YGDKCGIVNV SIMVKPDGND HKSSLPSSSF AVAPVDYAAC SWQATAAARN NQMWRPRTSS SMVSTAGYGG GRVVTGVPVW
201: CAYQRPS

Arabidopsis Description

BAP2BON1-associated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.