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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 4
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69632 Canola cytosol, mitochondrion 99.53 99.53
AT3G61190.2 Thale cress cytosol 65.88 72.4
CDY42491 Canola cytosol 59.72 69.61
CDX89102 Canola cytosol 59.72 68.48
CDY18902 Canola cytosol 52.13 54.73
CDX74764 Canola cytosol 50.71 53.23
CDX95663 Canola cytosol 48.34 50.25
CDY53895 Canola cytosol 46.92 49.01
CDY27361 Canola cytosol 44.08 46.27
CDY37063 Canola cytosol 43.6 44.88
VIT_15s0048g02070.t01 Wine grape cytosol 32.23 38.64
KRH48228 Soybean cytosol 32.7 38.55
PGSC0003DMT400071403 Potato cytosol 25.12 37.06
KRH77255 Soybean cytosol 30.33 36.57
KRH28237 Soybean cytosol 30.33 36.36
KRH65133 Soybean cytosol 30.33 35.56
Solyc01g091590.2.1 Tomato cytosol 29.38 32.63
KRH65134 Soybean cytosol 27.49 31.35
KRH48229 Soybean cytosol 23.7 30.67
KRH00634 Soybean cytosol 22.27 30.32
KRH00635 Soybean cytosol 24.64 28.89
KRH65136 Soybean cytosol 21.33 25.86
KRH48233 Soybean cytosol 21.8 25.7
KRH65139 Soybean cytosol 21.8 25.0
KRH65138 Soybean cytosol 19.43 24.7
KRH48231 Soybean cytosol 17.54 19.47
KRH48230 Soybean cytosol 17.06 18.95
KRH48232 Soybean cytosol 14.22 18.4
KRH65137 Soybean cytosol 16.59 18.32
KRH65135 Soybean mitochondrion 17.06 15.79
CDY01978 Canola plastid 3.79 4.52
CDY54055 Canola plastid 3.32 3.98
CDY51153 Canola cytosol 2.37 2.89
Protein Annotations
EnsemblPlants:CDX71760EnsemblPlantsGene:GSBRNA2T00155466001Gene3D:2.60.40.150InterPro:C2_domInterPro:C2_domain_sfInterPro:IPR000008
InterPro:IPR035892PANTHER:PTHR32246PANTHER:PTHR32246:SF20PFAM:PF00168ProteinID:CDX71760ProteinID:CDX71760.1
SEG:segSUPFAM:SSF49562UniParc:UPI0004EE8802MapMan:27.2.8::
Description
BnaC08g31140D
Coordinates
chrLK031795:+:371427..372193
Molecular Weight (calculated)
23899.8 Da
IEP (calculated)
9.858
GRAVY (calculated)
-0.498
Length
211 amino acids
Sequence
(BLAST)
001: MYILTQKQHM IYIRRTDHPR LYTTMTKTLE IDIRSAEGLK LNRRLLKKKT FAVARIGEKS RPSHLDVSGG SSPTWNCKLE MPMSGTEQFI YIEVLFRTSS
101: GREKKIGEAK IPTSDFMGRY SPEGHLNFLS YRLRDEYGDK CGIVNVSIMV KPYSTDEFKS SSTAMKDYGA CSSQAAETGL WRPRSEPPAI DGYGGRIVTG
201: VPVWCVLQRP T
Best Arabidopsis Sequence Match ( AT3G61190.2 )
(BLAST)
001: MIYFGRSIDN HYTTMMTKTL EIDLRSAEGL KLNRRPIKKK TFAVVKIDEK CRKSNLDESR RSNPTWNYKS EMPINGNEQF IFIEVFYRTG SGHDKKIGEA
101: KIPTNDFMGR YSPEGHLNFL SYRLRDEFGD KCGIVNLSIL VKSDPTRDYG ACSSQAAVTG LWRPRLETAS IDGYGGRTVT GVPVWGLYQR QF
Arabidopsis Description
BAP1BON1-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q941L2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.