Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54055 | Canola | plastid | 94.35 | 94.89 |
| CDY51153 | Canola | cytosol | 58.76 | 60.12 |
| CDX89102 | Canola | cytosol | 6.78 | 6.52 |
| CDY42491 | Canola | cytosol | 5.08 | 4.97 |
| CDX74764 | Canola | cytosol | 4.52 | 3.98 |
| CDY18902 | Canola | cytosol | 4.52 | 3.98 |
| CDY53895 | Canola | cytosol | 4.52 | 3.96 |
| CDX95663 | Canola | cytosol | 4.52 | 3.94 |
| CDX71760 | Canola | cytosol, mitochondrion | 4.52 | 3.79 |
| CDY69632 | Canola | cytosol, mitochondrion | 4.52 | 3.79 |
| CDY27361 | Canola | cytosol | 3.95 | 3.48 |
| CDY37063 | Canola | cytosol | 3.95 | 3.41 |
Protein Annotations
| EnsemblPlants:CDY01978 | EnsemblPlantsGene:GSBRNA2T00113287001 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | PANTHER:PTHR32246 | PANTHER:PTHR32246:SF20 | PFAM:PF00168 | ProteinID:CDY01978 | ProteinID:CDY01978.1 |
| SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI0004EDDA75 | MapMan:27.2.8 | : | : |
Description
BnaC02g27490D
Coordinates
chrLK031930:+:1050738..1051271
Molecular Weight (calculated)
19801.9 Da
IEP (calculated)
9.734
GRAVY (calculated)
-0.324
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRESLLLSA EKPTPRERLV VSSASALGQK SMTTRKLEIT AVSAEGLLIG GKPVKKTAFV AFDIAGNYSN RAMRTEVCGD YPVWKENLET EFSLPPEKKE
101: GFMYVRVYCE ISGGKDKHVG TARVPIKDFT GEYAPEGFLQ CLSYRLWDDY GKRNGIVNFS ARIVPVSKPG LRPFWLR
101: GFMYVRVYCE ISGGKDKHVG TARVPIKDFT GEYAPEGFLQ CLSYRLWDDY GKRNGIVNFS ARIVPVSKPG LRPFWLR
001: MSYSTFKRSL EIEVISAEGL KVDRKPLKKK TYSVVRIDEK SWASKVDELG GSYPIWKDRF DMEMPINASV RFISIEVYYR TSGSGRDKNV GYAKIPVTDF
101: MGGFAPQGHL NFLSYRLRDE YGDKCGIVNV SIMVKPDGND HKSSLPSSSF AVAPVDYAAC SWQATAAARN NQMWRPRTSS SMVSTAGYGG GRVVTGVPVW
201: CAYQRPS
101: MGGFAPQGHL NFLSYRLRDE YGDKCGIVNV SIMVKPDGND HKSSLPSSSF AVAPVDYAAC SWQATAAARN NQMWRPRTSS SMVSTAGYGG GRVVTGVPVW
201: CAYQRPS
Arabidopsis Description
BAP2BON1-associated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FX0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.