Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014450.1-P | Field mustard | cytosol | 88.59 | 96.45 |
| CDY42491 | Canola | cytosol | 88.04 | 89.5 |
| AT3G61190.2 | Thale cress | cytosol | 65.76 | 63.02 |
| CDX71760 | Canola | cytosol, mitochondrion | 68.48 | 59.72 |
| CDY69632 | Canola | cytosol, mitochondrion | 67.93 | 59.24 |
| CDY18902 | Canola | cytosol | 50.0 | 45.77 |
| CDX74764 | Canola | cytosol | 49.46 | 45.27 |
| CDX95663 | Canola | cytosol | 47.83 | 43.35 |
| CDY53895 | Canola | cytosol | 46.2 | 42.08 |
| CDY27361 | Canola | cytosol | 43.48 | 39.8 |
| CDY37063 | Canola | cytosol | 44.02 | 39.51 |
| KRH48228 | Soybean | cytosol | 35.33 | 36.31 |
| VIT_15s0048g02070.t01 | Wine grape | cytosol | 33.15 | 34.66 |
| KRH65133 | Soybean | cytosol | 33.7 | 34.44 |
| KRH77255 | Soybean | cytosol | 32.07 | 33.71 |
| KRH28237 | Soybean | cytosol | 32.07 | 33.52 |
| PGSC0003DMT400071403 | Potato | cytosol | 23.91 | 30.77 |
| KRH48229 | Soybean | cytosol | 26.63 | 30.06 |
| KRH65134 | Soybean | cytosol | 29.89 | 29.73 |
| Solyc01g091590.2.1 | Tomato | cytosol | 30.43 | 29.47 |
| KRH00634 | Soybean | cytosol | 24.46 | 29.03 |
| KRH00635 | Soybean | cytosol | 28.26 | 28.89 |
| KRH48233 | Soybean | cytosol | 23.91 | 24.58 |
| KRH65136 | Soybean | cytosol | 22.83 | 24.14 |
| KRH65138 | Soybean | cytosol | 21.74 | 24.1 |
| KRH65139 | Soybean | cytosol | 23.91 | 23.91 |
| KRH48230 | Soybean | cytosol | 21.2 | 20.53 |
| KRH65137 | Soybean | cytosol | 20.65 | 19.9 |
| KRH48231 | Soybean | cytosol | 20.11 | 19.47 |
| KRH65135 | Soybean | mitochondrion | 20.65 | 16.67 |
| KRH48232 | Soybean | cytosol | 14.67 | 16.56 |
| CDY01978 | Canola | plastid | 6.52 | 6.78 |
| CDY54055 | Canola | plastid | 5.98 | 6.25 |
| CDY51153 | Canola | cytosol | 4.89 | 5.2 |
Protein Annotations
| EnsemblPlants:CDX89102 | EnsemblPlantsGene:GSBRNA2T00149235001 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | PANTHER:PTHR32246 | PANTHER:PTHR32246:SF20 | PFAM:PF00168 | ProteinID:CDX89102 | ProteinID:CDX89102.1 |
| SEG:seg | SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI0004EF4539 | MapMan:27.2.8 | : |
Description
BnaA04g00840D
Coordinates
chrLK031857:-:1043202..1043756
Molecular Weight (calculated)
20782.0 Da
IEP (calculated)
10.122
GRAVY (calculated)
-0.421
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MIYLGRIDPL FYTTMTKTLE IDIRSAEGLK INRRLIKKKK TFAVVKIGEK SRSSDLDDSG GSNPTWNFKS EMPMKGSVQF ISIEVFYRTR CGRDKKIGEA
101: RIPATDFMGR YSHEGHLNFL SYRLRDEYGD KCGIVNVSIV VKPHSTETTT MFMASSSSSS SETPSIDGYR GRIVTGLPVW RVTT
101: RIPATDFMGR YSHEGHLNFL SYRLRDEYGD KCGIVNVSIV VKPHSTETTT MFMASSSSSS SETPSIDGYR GRIVTGLPVW RVTT
001: MIYFGRSIDN HYTTMMTKTL EIDLRSAEGL KLNRRPIKKK TFAVVKIDEK CRKSNLDESR RSNPTWNYKS EMPINGNEQF IFIEVFYRTG SGHDKKIGEA
101: KIPTNDFMGR YSPEGHLNFL SYRLRDEFGD KCGIVNLSIL VKSDPTRDYG ACSSQAAVTG LWRPRLETAS IDGYGGRTVT GVPVWGLYQR QF
101: KIPTNDFMGR YSPEGHLNFL SYRLRDEFGD KCGIVNLSIL VKSDPTRDYG ACSSQAAVTG LWRPRLETAS IDGYGGRTVT GVPVWGLYQR QF
Arabidopsis Description
BAP1BON1-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q941L2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.