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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plasma membrane 1
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus, plasma membrane, plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH20017
KRH41052
KRH54085
KRH63871

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G45760.1 KRH20017 AT5G07300.1 17631528
AT2G45760.1 KRH41052 AT5G07300.1 17631528
AT2G45760.1 KRH54085 AT5G07300.1 17631528
AT2G45760.1 KRH63871 AT5G07300.1 17631528
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH65138 Soybean cytosol 55.83 54.82
KRH65136 Soybean cytosol 57.67 54.02
KRH48233 Soybean cytosol 44.79 40.78
KRH65139 Soybean cytosol 42.94 38.04
KRH00634 Soybean cytosol 32.52 34.19
VIT_15s0048g02070.t01 Wine grape cytosol 32.52 30.11
KRH48231 Soybean cytosol 33.74 28.95
KRH48230 Soybean cytosol 33.13 28.42
KRH48229 Soybean cytosol 28.22 28.22
KRH65137 Soybean cytosol 31.29 26.7
KRH48228 Soybean cytosol 26.99 24.58
KRH65133 Soybean cytosol 26.99 24.44
KRH77255 Soybean cytosol 25.77 24.0
KRH28237 Soybean cytosol 25.77 23.86
KRH65134 Soybean cytosol 26.99 23.78
PGSC0003DMT400071403 Potato cytosol 20.86 23.78
Solyc01g091590.2.1 Tomato cytosol 27.61 23.68
KRH65135 Soybean mitochondrion 32.52 23.25
KRH00635 Soybean cytosol 24.54 22.22
CDY53895 Canola cytosol 22.09 17.82
Bra000402.1-P Field mustard cytosol 22.09 17.82
AT2G45760.1 Thale cress cytosol 22.09 17.39
CDX95663 Canola cytosol 20.86 16.75
CDX74764 Canola cytosol 20.25 16.42
Bra004936.1-P Field mustard cytosol 20.25 16.42
Bra014450.1-P Field mustard cytosol 16.56 15.98
CDY27361 Canola cytosol 19.63 15.92
CDY18902 Canola cytosol 19.63 15.92
CDY37063 Canola cytosol 19.63 15.61
Bra039316.1-P Field mustard cytosol 19.63 15.61
Bra007581.1-P Field mustard cytosol 17.79 15.51
CDY42491 Canola cytosol 16.56 14.92
CDX89102 Canola cytosol 16.56 14.67
CDX71760 Canola cytosol, mitochondrion 18.4 14.22
AT3G61190.2 Thale cress cytosol 16.56 14.06
CDY69632 Canola cytosol, mitochondrion 17.79 13.74
Protein Annotations
EMBL:ACUP02004213EnsemblPlants:KRH48232EnsemblPlantsGene:GLYMA_07G076500PANTHER:PTHR32246PANTHER:PTHR32246:SF20ProteinID:KRH48232
ProteinID:KRH48232.1SEG:segSUPFAM:SSF49562UniParc:UPI00023C708CUniProt:I1KIG7MapMan:35.2
Description
hypothetical protein
Coordinates
chr7:+:6939336..6940143
Molecular Weight (calculated)
18243.3 Da
IEP (calculated)
8.700
GRAVY (calculated)
0.047
Length
163 amino acids
Sequence
(BLAST)
001: MGASSGIVLE ITVISCENLR VMEDPYVVVR AESLNCCTTK MAKDSGSNKT SLFSWNEKLM LNMPMHAWST RSRCNAKGSR VFDRLGWPES PCRIFSAAAC
101: REISCTWSYR LKDWEGKENG VIHFAVRVEV APVKGTVVSK VLVMVSWESK LVTSVTKLLL VFE
Best Arabidopsis Sequence Match ( AT1G44790.1 )
(BLAST)
001: MAMWVFGYGS LIWKTGFPFD ESLPGFIKGY RRVFHQGSTD HRGTPDFPGR TVTLEAAHEE VCCGVAYKIT KEEDKRDALL HLEVREKQYD QKEYLDFFTD
101: SNASEPAVAG VMVYIASPDK KSNNNYLGPA PLEDIAKQIV KAKGPSGPNR DYLFNLEEAL AQLGFKDKHV TDLANQVRHI LSESEELDID ATAATANNV
Arabidopsis Description
GGCT2;3Gamma-glutamylcyclotransferase 2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q84QC1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.