Factsheet for PGSC0003DMT400071403

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g091590.2.1	Tomato	cytosol	74.83	56.32
VIT_15s0048g02070.t01	Wine grape	cytosol	43.36	35.23
KRH77255	Soybean	cytosol	42.66	34.86
KRH28237	Soybean	cytosol	42.66	34.66
KRH48228	Soybean	cytosol	43.36	34.64
KRH65133	Soybean	cytosol	43.36	34.44
KRH00634	Soybean	cytosol	37.06	34.19
KRH65136	Soybean	cytosol	34.97	28.74
Bra007581.1-P	Field mustard	cytosol	37.06	28.34
KRH48229	Soybean	cytosol	32.17	28.22
Bra000402.1-P	Field mustard	cytosol	39.86	28.22
CDY53895	Canola	cytosol	39.86	28.22
CDX95663	Canola	cytosol	39.86	28.08
Bra004936.1-P	Field mustard	cytosol	38.46	27.36
CDX74764	Canola	cytosol	37.76	26.87
CDY27361	Canola	cytosol	37.76	26.87
KRH65138	Soybean	cytosol	30.77	26.51
CDY18902	Canola	cytosol	37.06	26.37
KRH00635	Soybean	cytosol	32.87	26.11
AT2G45760.1	Thale cress	cytosol	37.76	26.09
KRH48233	Soybean	cytosol	32.17	25.7
Bra014450.1-P	Field mustard	cytosol	30.07	25.44
Bra039316.1-P	Field mustard	cytosol	36.36	25.37
CDY37063	Canola	cytosol	36.36	25.37
CDY69632	Canola	cytosol, mitochondrion	37.06	25.12
CDX71760	Canola	cytosol, mitochondrion	37.06	25.12
AT3G61190.2	Thale cress	cytosol	33.57	25.0
KRH65139	Soybean	cytosol	32.17	25.0
KRH65134	Soybean	cytosol	31.47	24.32
CDY42491	Canola	cytosol	30.77	24.31
CDX89102	Canola	cytosol	30.77	23.91
KRH65137	Soybean	cytosol	29.37	21.99
KRH48230	Soybean	cytosol	28.67	21.58
KRH48231	Soybean	cytosol	27.97	21.05
KRH48232	Soybean	cytosol	23.78	20.86
KRH65135	Soybean	mitochondrion	27.97	17.54

Protein Annotations

EnsemblPlants:PGSC0003DMT400071403	EnsemblPlantsGene:PGSC0003DMG400027781	PANTHER:PTHR32246	PANTHER:PTHR32246:SF20	PGSC:PGSC0003DMG400027781	SUPFAM:SSF49562
UniParc:UPI0002957679	UniProt:M1CNQ4	MapMan:27.2.8	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400027781]

Coordinates

chr1:+:71009381..71010087

Molecular Weight (calculated)

15533.7 Da

IEP (calculated)

9.473

GRAVY (calculated)

-0.158

Length

143 amino acids

Sequence
(BLAST)

001: MDKEGGGFPK WNEKLIVDLP MHARHLTVEV QCKNSSGIKT VGIAKVPTSD FIGGILPEDY LHFLSYRLRN EKGEKNGIIN FSVRVKNAAP PSQSAAGCAA
101: AYTQQWTAAP IDMGISYNGS CGVVTGVPVY PRSFLVNSMA KRF

Best Arabidopsis Sequence Match ( AT2G45760.1 )
(BLAST)

001: MSYSTFKRSL EIEVISAEGL KVDRKPLKKK TYSVVRIDEK SWASKVDELG GSYPIWKDRF DMEMPINASV RFISIEVYYR TSGSGRDKNV GYAKIPVTDF
101: MGGFAPQGHL NFLSYRLRDE YGDKCGIVNV SIMVKPDGND HKSSLPSSSF AVAPVDYAAC SWQATAAARN NQMWRPRTSS SMVSTAGYGG GRVVTGVPVW
201: CAYQRPS

Arabidopsis Description

BAP2BON1-associated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q58FX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.