Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93947 | Soybean | nucleus | 94.09 | 93.15 |
| KRH07102 | Soybean | cytosol | 23.01 | 80.71 |
| KRG94356 | Soybean | nucleus | 69.86 | 80.14 |
| KRH07106 | Soybean | cytosol, plastid | 45.01 | 75.94 |
| VIT_14s0066g00290.t01 | Wine grape | mitochondrion | 68.02 | 72.45 |
| KRH63659 | Soybean | cytosol, mitochondrion, nucleus, plastid | 60.08 | 69.09 |
| KRH54288 | Soybean | cytosol, mitochondrion, nucleus, plastid | 59.27 | 67.99 |
| Solyc02g093520.2.1 | Tomato | nucleus | 68.02 | 67.89 |
| Bra023465.1-P | Field mustard | cytosol, plastid | 61.71 | 67.18 |
| CDX85597 | Canola | cytosol, plastid | 61.71 | 67.18 |
| CDX91062 | Canola | cytosol, plastid | 61.51 | 66.81 |
| Bra000997.1-P | Field mustard | nucleus | 62.32 | 66.81 |
| CDY49066 | Canola | cytosol | 62.53 | 66.74 |
| CDX74310 | Canola | cytosol | 62.12 | 66.59 |
| Bra039105.1-P | Field mustard | nucleus | 61.71 | 66.45 |
| CDY09854 | Canola | nucleus, plastid | 62.93 | 66.31 |
| Bra008758.1-P | Field mustard | nucleus | 62.93 | 66.31 |
| CDX69581 | Canola | nucleus, plastid | 62.93 | 66.31 |
| CDY37509 | Canola | cytosol | 62.12 | 66.3 |
| CDX91935 | Canola | cytosol | 61.71 | 66.3 |
| PGSC0003DMT400032842 | Potato | mitochondrion | 65.17 | 65.84 |
| KRH43661 | Soybean | cytosol | 44.81 | 65.48 |
| Os01t0908700-01 | Rice | plasma membrane, plastid | 59.27 | 65.25 |
| KRH59243 | Soybean | endoplasmic reticulum, golgi | 61.1 | 65.22 |
| KRH43098 | Soybean | endoplasmic reticulum, golgi | 61.1 | 65.22 |
| CDX70564 | Canola | cytosol, plastid | 62.32 | 64.97 |
| EES04073 | Sorghum | nucleus | 60.69 | 64.92 |
| KRG97516 | Soybean | golgi, plasma membrane | 60.49 | 64.71 |
| Bra006253.1-P | Field mustard | nucleus, plastid | 61.91 | 64.54 |
| CDX78576 | Canola | cytosol, plastid | 61.71 | 64.33 |
| TraesCS3B01G449200.1 | Wheat | cytosol | 60.9 | 64.03 |
| GSMUA_Achr9P29460_001 | Banana | nucleus | 60.9 | 63.89 |
| TraesCS3D01G408900.1 | Wheat | cytosol | 60.49 | 63.73 |
| Zm00001d048784_P001 | Maize | cytosol | 39.92 | 63.64 |
| GSMUA_Achr8P01300_001 | Banana | nucleus | 56.21 | 63.59 |
| KRH31355 | Soybean | golgi, plasma membrane | 59.88 | 63.5 |
| Zm00001d042437_P005 | Maize | cytosol | 60.69 | 63.14 |
| TraesCS5B01G111900.1 | Wheat | cytosol | 30.96 | 63.07 |
| GSMUA_Achr6P06710_001 | Banana | nucleus | 56.62 | 60.43 |
| TraesCS3A01G414400.2 | Wheat | cytosol | 53.16 | 59.86 |
| KRG95016 | Soybean | nucleus, peroxisome, plasma membrane | 43.99 | 59.67 |
| Zm00001d012101_P002 | Maize | mitochondrion | 60.08 | 58.07 |
| KRH13149 | Soybean | cytosol, plastid | 48.47 | 57.07 |
| KRH59596 | Soybean | nucleus | 49.49 | 57.04 |
| KRH64018 | Soybean | nucleus | 49.69 | 56.48 |
| KRH44829 | Soybean | nucleus, plastid | 48.47 | 56.0 |
| TraesCS5D01G122000.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 56.01 | 51.21 |
| Os12t0288400-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 56.62 | 50.92 |
| HORVU5Hr1G039100.3 | Barley | endoplasmic reticulum, extracellular, golgi | 55.8 | 50.83 |
| Zm00001d041073_P001 | Maize | endoplasmic reticulum, golgi, vacuole | 55.8 | 50.65 |
| HORVU3Hr1G092250.6 | Barley | plastid | 56.62 | 50.09 |
| KRH40948 | Soybean | nucleus | 36.05 | 49.58 |
| AT1G24545.1 | Thale cress | cytosol | 18.13 | 48.9 |
| TraesCS5A01G103800.2 | Wheat | endoplasmic reticulum, extracellular, golgi | 55.4 | 48.66 |
| KRH53919 | Soybean | nucleus | 35.44 | 46.4 |
| OQU79014 | Sorghum | plastid | 49.49 | 45.94 |
| KRH20017 | Soybean | cytosol | 15.27 | 27.47 |
| KRH54085 | Soybean | cytosol | 20.98 | 17.82 |
| KRH68626 | Soybean | cytosol | 20.37 | 17.24 |
| KRH41052 | Soybean | endoplasmic reticulum | 20.37 | 17.24 |
| KRG96891 | Soybean | cytosol | 20.37 | 16.84 |
| KRH68625 | Soybean | cytosol | 20.16 | 16.75 |
| KRH63871 | Soybean | cytosol | 20.98 | 16.56 |
| KRH13085 | Soybean | extracellular, vacuole | 16.09 | 15.13 |
| KRH44837 | Soybean | extracellular, golgi | 15.89 | 15.12 |
| KRH44834 | Soybean | plasma membrane | 13.65 | 13.67 |
| KRH13151 | Soybean | nucleus, vacuole | 14.05 | 12.92 |
Protein Annotations
| EntrezGene:100799565 | MapMan:19.2.2.1.5.3.2 | MapMan:19.2.2.1.6.2 | Gene3D:3.30.40.10 | EMBL:ACUP02003241 | InterPro:Copine |
| EnsemblPlantsGene:GLYMA_05G115700 | UniProt:I1K2M5 | InterPro:IPR001841 | InterPro:IPR002035 | InterPro:IPR013083 | InterPro:IPR036465 |
| ProteinID:KRH58250.1 | EnsemblPlants:KRH58251 | ProteinID:KRH58251 | ProteinID:KRH58251.1 | ProteinID:KRH58252.1 | PFAM:PF07002 |
| PFAM:PF13920 | PFscan:PS50089 | PANTHER:PTHR10857 | PANTHER:PTHR10857:SF28 | SMART:SM00184 | SMART:SM00327 |
| SUPFAM:SSF53300 | SUPFAM:SSF57850 | SUPFAM:SSF81995 | UniParc:UPI000233A57A | InterPro:VWF_A | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | InterPro:vWFA_dom_sf | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:30687179..30692683
Molecular Weight (calculated)
53839.5 Da
IEP (calculated)
5.294
GRAVY (calculated)
-0.562
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGNNSKEDS NWRQNSPVRS SSSASSWGSY PDPNSGYGQG GYTYEQQQPS YPTQQQYYAQ PPPPLPQNYG YEPQPHASGR VASHRNEKRL DRKYSRIADN
101: YNSIDEVTEA LAHAGLESSN LILGIDFTKS NEWTGKHSFN RKSLHHIGNG PNPYEQAISI IGKTLAAFDE DNLIPCFGFG DASTHDQDVF SFYPDERFCN
201: GFEEVLSQYR EIVPNIRLAG PTSFAPIVEM AMTIVEQSGG QYHVLVIVAD GQVTRSIDTE RGRLSPQEQR TVDAIVEASK FPLSIILVGV GDGPWDMMKE
301: FDDNIPARAF DNFQFVNFTE IMSKNIPPSR KEAAFALAAL MEIPSQYKAA IELNLLGSRN ANAPQRVALP TPSYGSASMG TSKPYGSASF GASKPYGSAS
401: FDAPKPFGSS KPSHPANFEQ SAPSYYDNRD LVGTAPPAPS STYDNQLCPI CLTNSKDMAF GCGHQTCCEC GQDLQSCPIC RSPINTRIKL Y
101: YNSIDEVTEA LAHAGLESSN LILGIDFTKS NEWTGKHSFN RKSLHHIGNG PNPYEQAISI IGKTLAAFDE DNLIPCFGFG DASTHDQDVF SFYPDERFCN
201: GFEEVLSQYR EIVPNIRLAG PTSFAPIVEM AMTIVEQSGG QYHVLVIVAD GQVTRSIDTE RGRLSPQEQR TVDAIVEASK FPLSIILVGV GDGPWDMMKE
301: FDDNIPARAF DNFQFVNFTE IMSKNIPPSR KEAAFALAAL MEIPSQYKAA IELNLLGSRN ANAPQRVALP TPSYGSASMG TSKPYGSASF GASKPYGSAS
401: FDAPKPFGSS KPSHPANFEQ SAPSYYDNRD LVGTAPPAPS STYDNQLCPI CLTNSKDMAF GCGHQTCCEC GQDLQSCPIC RSPINTRIKL Y
001: MGTGNSKENW RQSSFRSTSA SSASPSSSSW ASQQSYPQYG AESYNYPPPP SYAQPPEYTQ PPPPLYSTQP YSAPSYSAPP SQSYGSDNKK RLERKYSKIS
101: DDYSSLEQVT EALARAGLES SNLIVGIDFT KSNEWTGARS FNRKSLHFIG SSPNPYEQAI TIIGRTLAAF DEDNLIPCYG FGDASTHDQD VFSFNSEDRF
201: CNGFEEVLSR YKEIVPQLKL AGPTSFAPII DMAMTIVEQS GGQYHVLVII ADGQVTRSVD TENGQLSPQE QKTVDAIVQA SKLPLSIVLV GVGDGPWDMM
301: REFDDNIPAR AFDNFQFVNF TEIMAKNKAQ SLKETEFALS ALMEIPQQYK ATIELNLLGR RNGYIPERFP LPPPMRGGSS SYNSPKPSRL PSFKPSVPPH
401: PTEGYHVRSS PVPPPTSSAS DNQLCPICLS NPKDMAFGCG HQTCCECGPD LQMCPICRAP IQTRIKLY
101: DDYSSLEQVT EALARAGLES SNLIVGIDFT KSNEWTGARS FNRKSLHFIG SSPNPYEQAI TIIGRTLAAF DEDNLIPCYG FGDASTHDQD VFSFNSEDRF
201: CNGFEEVLSR YKEIVPQLKL AGPTSFAPII DMAMTIVEQS GGQYHVLVII ADGQVTRSVD TENGQLSPQE QKTVDAIVQA SKLPLSIVLV GVGDGPWDMM
301: REFDDNIPAR AFDNFQFVNF TEIMAKNKAQ SLKETEFALS ALMEIPQQYK ATIELNLLGR RNGYIPERFP LPPPMRGGSS SYNSPKPSRL PSFKPSVPPH
401: PTEGYHVRSS PVPPPTSSAS DNQLCPICLS NPKDMAFGCG HQTCCECGPD LQMCPICRAP IQTRIKLY
Arabidopsis Description
RGLG2E3 ubiquitin-protein ligase RGLG2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY87]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.