Factsheet for HORVU3Hr1G092250.6

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G414400.2	Wheat	cytosol	72.25	91.97
TraesCS3D01G408900.1	Wheat	cytosol	76.4	90.99
TraesCS3B01G449200.1	Wheat	cytosol	76.4	90.79
Os01t0908700-01	Rice	plasma membrane, plastid	66.85	83.18
EES04073	Sorghum	nucleus	65.95	79.74
Zm00001d042437_P005	Maize	cytosol	65.95	77.54
Zm00001d012101_P002	Maize	mitochondrion	65.95	72.05
Zm00001d048784_P001	Maize	cytosol	38.92	70.13
GSMUA_Achr9P29460_001	Banana	nucleus	57.12	67.73
GSMUA_Achr8P01300_001	Banana	nucleus	52.61	67.28
CDY27584	Canola	cytosol	27.03	64.66
VIT_01s0137g00460.t01	Wine grape	nucleus	50.99	64.03
VIT_17s0000g09640.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	49.55	63.51
KRH54288	Soybean	cytosol, mitochondrion, nucleus, plastid	48.83	63.32
KRH63659	Soybean	cytosol, mitochondrion, nucleus, plastid	48.29	62.76
Solyc03g111870.2.1	Tomato	nucleus	49.19	62.47
Bra032793.1-P	Field mustard	nucleus	42.88	62.3
KRG94356	Soybean	nucleus	47.93	62.15
CDX84957	Canola	cytosol	43.06	62.08
KRH43098	Soybean	endoplasmic reticulum, golgi	50.27	60.65
KRH59243	Soybean	endoplasmic reticulum, golgi	49.91	60.22
CDX85597	Canola	cytosol, plastid	48.47	59.65
Bra023465.1-P	Field mustard	cytosol, plastid	48.47	59.65
CDX91062	Canola	cytosol, plastid	48.47	59.51
VIT_14s0066g00290.t01	Wine grape	mitochondrion	49.19	59.22
PGSC0003DMT400032842	Potato	mitochondrion	51.71	59.05
KRG97516	Soybean	golgi, plasma membrane	48.47	58.61
Bra008758.1-P	Field mustard	nucleus	49.19	58.58
CDY09854	Canola	nucleus, plastid	49.19	58.58
CDX69581	Canola	nucleus, plastid	49.19	58.58
AT5G14420.2	Thale cress	nucleus, plastid	49.01	58.12
Bra039105.1-P	Field mustard	nucleus	47.75	58.11
CDY49066	Canola	cytosol	48.11	58.04
Solyc02g093520.2.1	Tomato	nucleus	51.35	57.93
CDX74310	Canola	cytosol	47.75	57.86
Bra000997.1-P	Field mustard	nucleus	47.75	57.86
CDY37509	Canola	cytosol	47.93	57.83
CDY01855	Canola	cytosol, plastid	45.95	57.82
CDX70564	Canola	cytosol, plastid	49.01	57.75
HORVU7Hr1G048620.13	Barley	cytosol	41.44	57.64
Bra004260.1-P	Field mustard	plastid	45.59	57.37
CDX91935	Canola	cytosol	47.21	57.33
CDX78576	Canola	cytosol, plastid	48.65	57.32
KRH31355	Soybean	golgi, plasma membrane	47.75	57.24
CDY56212	Canola	plastid	45.41	57.14
Bra006253.1-P	Field mustard	nucleus, plastid	48.47	57.11
KRH58251	Soybean	nucleus	50.09	56.62
KRG93947	Soybean	nucleus	50.09	56.05
AT1G67800.2	Thale cress	plasma membrane	45.41	55.63
AT3G01650.2	Thale cress	cytosol	47.93	54.4
HORVU5Hr1G039100.3	Barley	endoplasmic reticulum, extracellular, golgi	48.29	49.72
KRG95016	Soybean	nucleus, peroxisome, plasma membrane	30.45	46.69
HORVU5Hr1G091920.4	Barley	endoplasmic reticulum	28.65	44.92
HORVU3Hr1G110870.14	Barley	mitochondrion	37.3	43.4
HORVU3Hr1G110850.8	Barley	cytosol	27.03	43.1
CDY27585	Canola	cytosol	10.09	43.08
AT1G24545.1	Thale cress	cytosol	13.15	40.11
PGSC0003DMT400039186	Potato	cytosol	48.83	28.23
HORVU6Hr1G010680.1	Barley	cytosol	17.48	16.33
HORVU1Hr1G058000.10	Barley	cytosol	18.56	15.58
HORVU6Hr1G041140.14	Barley	mitochondrion	17.3	14.91

Protein Annotations

EnsemblPlants:HORVU3Hr1G092250.6	EnsemblPlantsGene:HORVU3Hr1G092250	InterPro:Copine	InterPro:IPR002035	InterPro:IPR036465	InterPro:VWF_A
InterPro:vWFA_dom_sf	PANTHER:PTHR10857	PANTHER:PTHR10857:SF28	PFAM:PF07002	SEG:seg	SMART:SM00327
SUPFAM:SSF53300	UniParc:UPI000B478A9F	UniProt:A0A287M9Z8	MapMan:19.2.2.1.5.3.2	MapMan:19.2.2.1.6.2	:

Description

No Description!

Coordinates

chrchr3H:-:637569971..637574923

Molecular Weight (calculated)

60500.7 Da

IEP (calculated)

8.407

GRAVY (calculated)

-0.586

Length

555 amino acids

Sequence
(BLAST)

001: THSLAEKVTQ RNQNSNHRQP SQQRPPAAHY RTGPTQAARR STHEASSRPR KPSAARRRWH RSRLRRRHRG LICGDIYPST AASDEGRRGS LERGMGGGHS
101: RSESREGSGN GNGRYAHSSS FQQPATATRW DQPGGGYPYG AGQDAQGGYY GAPPQQGGYA APYPAYQPAP VAAQPAPARA GKPRLDRRYS RIADDFQSVE
201: QVTDALAQAG LESSNLIVGI DFTKSNEWTG KFSFHGRSLH HISSVPNPYE QGISILGQTL SKFDEDNLIP CFGFGDASTH DQDVFCFYPD ERPCNGFSEA
301: LERYRELVPH LRLAGPTSFA PIIEMAMTIV EQSGGQYHVL LIIADGQVTR SVDTASGQLS SQEQKTVDAI VRASELPLSI VLVGVGDGPW DMMKEFDDNI
401: PARAFDNFQF VNFSEIMSKN MPQSRKEAAF ALSALMEIPQ QYKATVELGI LGRRSMKAPE RVPLPPPGGS HDAYSYGTKS FSKPQASTSS SAYPPYEGAH
501: RAAPAAPSSA YDNQVCPICL VNPKDMAFGC GHQVSGLAHC CCFLGNHFSC FVRVC

Best Arabidopsis Sequence Match ( AT3G01650.1 )
(BLAST)

001: MGGGNSKEES SSPSSSSWAS HQSYPQYGPD SYNYPPPPTY APAPSPAPAP APVPAPSPAS SYGPQYSQEG YASQPNNPPP PTYAPAPSPA SSYGHQYSQE
101: GYASAASQPN YPPPPSQSQV ADRKKFDRRY SKISDNYSSL LQVSEALGRA GLESSNLIVG IDFTKSNEWT GAKSFNRKSL HHLSNTPNPY EQAITIIGRT
201: LAAFDEDNLI PCYGFGDAST HDQDVFSFYP EGRFCNGFEE VLARYREIVP QLKLAGPTSF APIIEMAMTV VEQSSGQYHV LVIIADGQVT RSVDTEHGRL
301: SPQEQKTVDA IVKASTLPLS IVLVGVGDGP WDMMQEFDDN IPARAFDNFQ FVNFTEIMSK NKDQSRKETE FALSALMEIP PQYKATIELN LLGVRNGNIP
401: QRIPLPPPVQ SGSSFSSSRI PNFEPSVPPY PFESKQMSSA DDIQLCPICL SNPKNMAFGC GHQTCCECGP DLKVCPICRA PIQTRIKLY

Arabidopsis Description

RGLG1E3 ubiquitin-protein ligase RGLG1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.