Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58251 | Soybean | nucleus | 93.15 | 94.09 |
| KRG94356 | Soybean | nucleus | 68.75 | 79.67 |
| KRH07102 | Soybean | cytosol | 22.38 | 79.29 |
| KRH07106 | Soybean | cytosol, plastid | 44.56 | 75.94 |
| VIT_14s0066g00290.t01 | Wine grape | mitochondrion | 68.15 | 73.32 |
| KRH63659 | Soybean | cytosol, mitochondrion, nucleus, plastid | 59.27 | 68.85 |
| KRH54288 | Soybean | cytosol, mitochondrion, nucleus, plastid | 58.47 | 67.76 |
| Solyc02g093520.2.1 | Tomato | nucleus | 67.14 | 67.68 |
| Bra000997.1-P | Field mustard | nucleus | 62.1 | 67.25 |
| CDY49066 | Canola | cytosol | 62.3 | 67.17 |
| Bra039105.1-P | Field mustard | nucleus | 61.69 | 67.11 |
| CDX74310 | Canola | cytosol | 61.9 | 67.03 |
| CDY37509 | Canola | cytosol | 62.1 | 66.96 |
| CDX85597 | Canola | cytosol, plastid | 60.69 | 66.74 |
| Bra023465.1-P | Field mustard | cytosol, plastid | 60.69 | 66.74 |
| CDX91935 | Canola | cytosol | 61.49 | 66.74 |
| CDX91062 | Canola | cytosol, plastid | 60.69 | 66.59 |
| CDY09854 | Canola | nucleus, plastid | 62.3 | 66.31 |
| CDX69581 | Canola | nucleus, plastid | 62.3 | 66.31 |
| Bra008758.1-P | Field mustard | nucleus | 62.1 | 66.09 |
| PGSC0003DMT400032842 | Potato | mitochondrion | 64.31 | 65.64 |
| CDX70564 | Canola | cytosol, plastid | 62.3 | 65.61 |
| KRH43661 | Soybean | cytosol | 44.35 | 65.48 |
| KRH43098 | Soybean | endoplasmic reticulum, golgi | 60.69 | 65.43 |
| Bra006253.1-P | Field mustard | nucleus, plastid | 62.1 | 65.39 |
| KRH59243 | Soybean | endoplasmic reticulum, golgi | 60.48 | 65.22 |
| CDX78576 | Canola | cytosol, plastid | 61.9 | 65.18 |
| Os01t0908700-01 | Rice | plasma membrane, plastid | 58.47 | 65.02 |
| KRG97516 | Soybean | golgi, plasma membrane | 59.68 | 64.49 |
| EES04073 | Sorghum | nucleus | 59.68 | 64.49 |
| GSMUA_Achr9P29460_001 | Banana | nucleus | 60.48 | 64.1 |
| GSMUA_Achr8P01300_001 | Banana | nucleus | 56.05 | 64.06 |
| TraesCS3B01G449200.1 | Wheat | cytosol | 60.28 | 64.03 |
| TraesCS3D01G408900.1 | Wheat | cytosol | 59.88 | 63.73 |
| KRH31355 | Soybean | golgi, plasma membrane | 59.48 | 63.71 |
| TraesCS5B01G111900.1 | Wheat | cytosol | 30.85 | 63.49 |
| Zm00001d048784_P001 | Maize | cytosol | 39.31 | 63.31 |
| Zm00001d042437_P005 | Maize | cytosol | 59.88 | 62.92 |
| GSMUA_Achr6P06710_001 | Banana | nucleus | 56.45 | 60.87 |
| TraesCS3A01G414400.2 | Wheat | cytosol | 52.62 | 59.86 |
| KRG95016 | Soybean | nucleus, peroxisome, plasma membrane | 43.15 | 59.12 |
| Zm00001d012101_P002 | Maize | mitochondrion | 59.27 | 57.87 |
| KRH59596 | Soybean | nucleus | 48.99 | 57.04 |
| KRH13149 | Soybean | cytosol, plastid | 46.98 | 55.88 |
| KRH64018 | Soybean | nucleus | 48.39 | 55.56 |
| KRH44829 | Soybean | nucleus, plastid | 47.18 | 55.06 |
| Os12t0288400-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 56.85 | 51.65 |
| TraesCS5D01G122000.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 55.85 | 51.58 |
| Zm00001d041073_P001 | Maize | endoplasmic reticulum, golgi, vacuole | 56.05 | 51.39 |
| HORVU5Hr1G039100.3 | Barley | endoplasmic reticulum, extracellular, golgi | 55.65 | 51.21 |
| KRH40948 | Soybean | nucleus | 36.09 | 50.14 |
| HORVU3Hr1G092250.6 | Barley | plastid | 56.05 | 50.09 |
| AT1G24545.1 | Thale cress | cytosol | 17.94 | 48.9 |
| TraesCS5A01G103800.2 | Wheat | endoplasmic reticulum, extracellular, golgi | 55.04 | 48.84 |
| OQU79014 | Sorghum | plastid | 50.0 | 46.88 |
| KRH53919 | Soybean | nucleus | 34.48 | 45.6 |
| KRH20017 | Soybean | cytosol | 14.72 | 26.74 |
| KRH54085 | Soybean | cytosol | 20.56 | 17.65 |
| KRH41052 | Soybean | endoplasmic reticulum | 20.16 | 17.24 |
| KRH68626 | Soybean | cytosol | 19.96 | 17.07 |
| KRG96891 | Soybean | cytosol | 19.96 | 16.67 |
| KRH68625 | Soybean | cytosol | 19.76 | 16.58 |
| KRH63871 | Soybean | cytosol | 20.56 | 16.4 |
| KRH13085 | Soybean | extracellular, vacuole | 15.73 | 14.94 |
| KRH44837 | Soybean | extracellular, golgi | 15.52 | 14.92 |
| KRH44834 | Soybean | plasma membrane | 13.1 | 13.27 |
| KRH13151 | Soybean | nucleus, vacuole | 13.51 | 12.55 |
Protein Annotations
| EntrezGene:100819098 | MapMan:19.2.2.1.5.3.2 | MapMan:19.2.2.1.6.2 | Gene3D:3.30.40.10 | EMBL:ACUP02011657 | InterPro:Copine |
| EnsemblPlantsGene:GLYMA_19G051500 | UniProt:I1N6V2 | InterPro:IPR001841 | InterPro:IPR002035 | InterPro:IPR013083 | InterPro:IPR036465 |
| ProteinID:KRG93944.1 | ProteinID:KRG93945.1 | ProteinID:KRG93946.1 | EnsemblPlants:KRG93947 | ProteinID:KRG93947 | ProteinID:KRG93947.1 |
| PFAM:PF07002 | PFAM:PF13920 | PFscan:PS50089 | PANTHER:PTHR10857 | PANTHER:PTHR10857:SF28 | SMART:SM00184 |
| SMART:SM00327 | SUPFAM:SSF53300 | SUPFAM:SSF57850 | UniParc:UPI000233E5B5 | InterPro:VWF_A | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | InterPro:vWFA_dom_sf | : | : | : |
Description
hypothetical protein
Coordinates
chr19:+:8378212..8384364
Molecular Weight (calculated)
54043.7 Da
IEP (calculated)
5.286
GRAVY (calculated)
-0.525
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGNNSKEDN NNWRQNSSVR SSSSASSWGS YPDPQSGYGH GGYAYEPQQP SYPTQQPYYA QPPPPPPNYG NEPQPHASGR VAGHRNEKRL DRKYSRITDN
101: YNSIDEVTEA LARAGLESSN LILGIDFTKS NEWTGKHSFN RKSLHHIGNG PNPYEQAISI IGKTLAAFDE DNLIPCFGFG DASTHDQDVF SFYPDERICN
201: GFEEVLSRYR EIVPIIRLAG PTSFAPIVEM AMTIVEQTGG QYHVLVIVAD GQVTRSIDTE HGRLSPQEQS TVDAIVEASK FPLSIILVGV GDGPWDMMKE
301: FDDNIPARVF DNFQFVNFTE IMSKNIPPSR KEAAFALAAL MEIPSQYKAT IELNLLGGRN ANAPQRVALP TPSYGSASMG ISKPYGSASF GASKPYGSAS
401: FDAPKPYGSA SFSSSKPSHA ASFEQSAPSY YDNTDPVGTA PPAPSSSYDN QLCPICLTNS KDMAFGCGHQ TCCECGQDLQ SCPICRSPIN TRIKLY
101: YNSIDEVTEA LARAGLESSN LILGIDFTKS NEWTGKHSFN RKSLHHIGNG PNPYEQAISI IGKTLAAFDE DNLIPCFGFG DASTHDQDVF SFYPDERICN
201: GFEEVLSRYR EIVPIIRLAG PTSFAPIVEM AMTIVEQTGG QYHVLVIVAD GQVTRSIDTE HGRLSPQEQS TVDAIVEASK FPLSIILVGV GDGPWDMMKE
301: FDDNIPARVF DNFQFVNFTE IMSKNIPPSR KEAAFALAAL MEIPSQYKAT IELNLLGGRN ANAPQRVALP TPSYGSASMG ISKPYGSASF GASKPYGSAS
401: FDAPKPYGSA SFSSSKPSHA ASFEQSAPSY YDNTDPVGTA PPAPSSSYDN QLCPICLTNS KDMAFGCGHQ TCCECGQDLQ SCPICRSPIN TRIKLY
001: MGGGNSKEES SSPSSSSWAS HQSYPQYGPD SYNYPPPPTY APAPSPAPAP APVPAPSPAS SYGPQYSQEG YASQPNNPPP PTYAPAPSPA SSYGHQYSQE
101: GYASAASQPN YPPPPSQSQV ADRKKFDRRY SKISDNYSSL LQVSEALGRA GLESSNLIVG IDFTKSNEWT GAKSFNRKSL HHLSNTPNPY EQAITIIGRT
201: LAAFDEDNLI PCYGFGDAST HDQDVFSFYP EGRFCNGFEE VLARYREIVP QLKLAGPTSF APIIEMAMTV VEQSSGQYHV LVIIADGQVT RSVDTEHGRL
301: SPQEQKTVDA IVKASTLPLS IVLVGVGDGP WDMMQEFDDN IPARAFDNFQ FVNFTEIMSK NKDQSRKETE FALSALMEIP PQYKATIELN LLGVRNGNIP
401: QRIPLPPPVQ SGSSFSSSRI PNFEPSVPPY PFESKQMSSA DDIQLCPICL SNPKNMAFGC GHQTCCECGP DLKVCPICRA PIQTRIKLY
101: GYASAASQPN YPPPPSQSQV ADRKKFDRRY SKISDNYSSL LQVSEALGRA GLESSNLIVG IDFTKSNEWT GAKSFNRKSL HHLSNTPNPY EQAITIIGRT
201: LAAFDEDNLI PCYGFGDAST HDQDVFSFYP EGRFCNGFEE VLARYREIVP QLKLAGPTSF APIIEMAMTV VEQSSGQYHV LVIIADGQVT RSVDTEHGRL
301: SPQEQKTVDA IVKASTLPLS IVLVGVGDGP WDMMQEFDDN IPARAFDNFQ FVNFTEIMSK NKDQSRKETE FALSALMEIP PQYKATIELN LLGVRNGNIP
401: QRIPLPPPVQ SGSSFSSSRI PNFEPSVPPY PFESKQMSSA DDIQLCPICL SNPKNMAFGC GHQTCCECGP DLKVCPICRA PIQTRIKLY
Arabidopsis Description
RGLG1E3 ubiquitin-protein ligase RGLG1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS90]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.